| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0854 |
|---|
| Symbol | |
|---|
| ID | 6289481 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 906745 |
|---|
| End bp | 907500 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642624418 |
|---|
| Product | extracellular solute-binding protein family 3 |
|---|
| Protein accession | YP_001898436 |
|---|
| Protein GI | 187927949 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0178983 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.218059 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCGT TCTTGGCTGC AACAACGGCT GCATTCGCGC TCCTGCTGCT TGCTGATCCT
GGCGCATCCT CTGCGCAACC GGTGCTGAAA GCGGGCAGCA CCACAGCAGG CCAACCAACG
TCGGGCCTGA ATCCGCAAAC GAAGCAGCTC GAAGGTATAT CGGTGGAGGT TCTTCAGGCG
ATTGCGAAAG ATACTGGACT GCAGATTGAA TTCAAGCCGA TGACTTTCGC GGAACTGCAG
CCAGCCTTGC TGGAAGGGAA GATCGATATC ATCGCCGCCT CCTTTGGGAT CACCCCTACG
CGACAAAAAA TCGTCGAGTT TACTGACGTC TATGGGTCAT ATCGAGACAA GCTGCTGGTC
TCCATCAACG ACACAAAGAC GTACCGATCA GCGGCCGATT TCAAGGGGAT GGCGATCGCA
ATTCCAAAAG GAAGTACATA CATAGATGGC CTGAAAGACG CCGGTGCCAT CCTGACATTT
GTCAGCACAC CTCCAGAAGC GATCGGTGAA CTGGAAGCAG GCCGCGTTGC CGGCGTTGTC
GACAACGGAC TGCAGATCGC GTATCGCATG CAGAACAACG CGCACCCCGC GCTCAAGATT
GTGGATTCGT ATCAACCGAT CCAGGAAGGC AAGCTGGCAT TTGCTGTGAG GAAAGGCGAT
GCAGACCTGC TCGCAAAGCT CAATACATCA CTGAAGAAGC TGCAAGCCAA TGGCACGGTT
AAGGCGATTT ATTTCAGGTG GGGACTCGAT CTGTGA
|
|---|
| Protein sequence | MKPFLAATTA AFALLLLADP GASSAQPVLK AGSTTAGQPT SGLNPQTKQL EGISVEVLQA
IAKDTGLQIE FKPMTFAELQ PALLEGKIDI IAASFGITPT RQKIVEFTDV YGSYRDKLLV
SINDTKTYRS AADFKGMAIA IPKGSTYIDG LKDAGAILTF VSTPPEAIGE LEAGRVAGVV
DNGLQIAYRM QNNAHPALKI VDSYQPIQEG KLAFAVRKGD ADLLAKLNTS LKKLQANGTV
KAIYFRWGLD L
|
|---|
| |