Gene Rpic_0819 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0819 
Symbol 
ID6286503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp862169 
End bp863170 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content65% 
IMG OID642624382 
Producthypothetical protein 
Protein accessionYP_001898401 
Protein GI187927914 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1171] Threonine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCCCA TAGCTACCTC CGCATCGCTG GACCGTGCCG CTGAATTGCG CCATCTGCGC 
GCTGCGGCCA GCGTCGTTCA TGCGGTGATT CCACCGACCC CGCAGTACTG CTGGCCGGTG
CTCTCGCAAG CCATGGGCAC GGCGGTGTGC GTGAAGCATG AGAACCACAC GGAAGTGGGC
GCGTTCAAGG TGCGCGGCGG GCTGACTTAT CTGCATGCCT TGCGCCAACG TGAGCCGCAG
GTGCGTGGTG TGATAGCGGC GACGCGCGGC AATCATGGCC AGTCGATTGC ATGGGCGGCG
CGTCGTAACG GTATCGCTGT CAACATCGTC GTGCCGCATG GCAACAGCGT GGAGAAGAAC
GCCGCCATAC GCGCGCTCGG CGCAGAGCTC ATCGAAGCGG GCGATGACTT CCAGGCCAGC
CGCGAGGCGG CCGATCAACT GGCCGCTGAA CGTCGCTTGC ACTTCGTGCC CTCGTATCAC
GATGACCTGG TCGTCGGCGT AGCAAGCTAC TGGCTGGAGT TCCTCGAGGC CACGCCGCTG
GATGTTGTCT ATGTGCCGAT CGGCATGGGT TCGGGAATTT GCGCGGCGGT GCGGGCGCGC
GATGCGCTGG GGCTGTCGAC GCGCATTGTC GGCGTCGTGT CAGCACATGC GCGATGCTAT
GAGCAATCTT TCGCAAGCGG GACCGTGGTG TCGGCGCCGG TATCGACGCT GCTGGCTGAC
GGGCTTGCAT GTCGCACACC GGATGCGAAG GCGCTGGAGG TGATCCGCGC TGGCGTCGAC
CACATCATTG CGGTGACGGA TGACGAGGTG GCAGAGGCTA TTCGCCTGTA TTTCTCCACC
ACCCACAACG TGGCCGAAGG CGCTGCCGCC GCAGCCCTGG CGGGGGCATG GCAGCAGCGC
GAGCGGATTG CCGGCCAGCG TATCGGCCTG CCGCTGACCG GTGGCAACAT TGATCGCGCC
AAGCTGGCGC GCGTGCTCGC CGGTCAGCCA ATCCTGGCTT AG
 
Protein sequence
MSPIATSASL DRAAELRHLR AAASVVHAVI PPTPQYCWPV LSQAMGTAVC VKHENHTEVG 
AFKVRGGLTY LHALRQREPQ VRGVIAATRG NHGQSIAWAA RRNGIAVNIV VPHGNSVEKN
AAIRALGAEL IEAGDDFQAS REAADQLAAE RRLHFVPSYH DDLVVGVASY WLEFLEATPL
DVVYVPIGMG SGICAAVRAR DALGLSTRIV GVVSAHARCY EQSFASGTVV SAPVSTLLAD
GLACRTPDAK ALEVIRAGVD HIIAVTDDEV AEAIRLYFST THNVAEGAAA AALAGAWQQR
ERIAGQRIGL PLTGGNIDRA KLARVLAGQP ILA