| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0798 |
|---|
| Symbol | |
|---|
| ID | 6286444 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | + |
|---|
| Start bp | 844909 |
|---|
| End bp | 846528 |
|---|
| Gene Length | 1620 bp |
|---|
| Protein Length | 539 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642624362 |
|---|
| Product | Alkaline phosphatase |
|---|
| Protein accession | YP_001898381 |
|---|
| Protein GI | 187927894 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3540] Phosphodiesterase/alkaline phosphatase D |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGACC AGCCGATCTT CAAGCCGACC CGCCGCACGC TGATCAAAGG CCTCGTTTCC
GCCAGCGGCA CCGCGCTCCT CAGCTCGCGT ATCGGCGACG TGCTGGCCCA GGGCGCCGCA
CCGGCCGCAA TGACGTCCGA GCGCCTGCGC CCGCAAGTGC CAGGCGGCGT GATGAGCGGT
GATATCACGG CCGGCAGCGC CATCGTCTGG AGCCGCACCG ATCGTCCGGC ACGCATGATC
GTCGAATACT CGACGGACGC CGCCTTCAAG AACGTCGCGC GTCGCATCGG CCCCGCGGCC
CTTGAAAGCA ACGGCCTGAC AGCTCGGGTC GACCTGAACG GCCTGCCAGC CGGCGCAGAC
CTGTTTTACC GCGTGCGCTT CCAGGACCTC GTGCACGACA AGGCCTTCAG CGAGCCGGTT
GCCGGTCGCT TCCGCACGGC ACCCATGCAG GCCAATCGCC CCATCTGCTT TGTCTTCTCT
GGCGACGAGG CCGGCCAAGG CTGGGGCATC AACGAGCGCT TCGGCGGCTA TCGTCTGTAT
GAGGCAATGC GCCGCGAATC GCCCGACTTC TTCATCCACT CCGGCGATCA GATCTATGCC
GACGGCCCGA TCCAGGCCGA GGTGAAACTG CCCGACGGCG CGCTGTGGAC CAACCTCGTT
ACCGAGGCCA AATCGCACGT TGCACAGACG CTCGACGACT ACCGCGGCGC CTTTGCCTAC
AACCAGCTGG ACAAGAACAA GCGCGCGTTT TCCGCCGAAG TGCCGTTCCT CGTGCAGTGG
GACGACCACG AGGTGCGCAA CAACTGGTAC CCCGGCCAGC AGATCGGCCC GGAAGAGAAG
CGCTATCAGG AGCGCAGCGC ATCGCTGCTG GCGGCCCGCG CGAAGCAGGC GATGTTCGAG
TACAACCCGT TCCGCTTCAA TCCGATCGAC CCAGAGCAGA TCTACCGCGC GTTCCAGTAC
GGCCCGCTGC TCGACGTATT CATGCTGGAC GAGCGCAGCT ATCGCGGGCG CAATTCGCCG
AACCGCCAGA CCCGGCTGGA TGCCGATTCG GCCTTCCTCG GCCCGGCACA GGCGGCGTGG
CTCAAGCAAT CGCTCAAGCA GTCAAAGGCG ACGTGGAAGG TGATTGCCAG CGACATGCCG
ATCTCGCTGG TGGTGCCTGA TCTGAACCCC GATGTGCCCA AGGGCACCTA TGAAGCGTGG
GCCAATGCGG ATGACGGCAT GCCGTCGGGC CGCGAACTGG AGTTGGCCGA GATCCTGCGC
TTCATCAAGC AGGAAAACAT CCAGAACGTG GTCTGGGTGA CGGCTGACGT GCACTACGCG
CAGGCTACGT ACTACCACCC GTCGCGCGCC AAGTTCACGG ATTTCAAACC GTTCTGGGAG
TTCGTTGGCG GCCCCATCAA CGCGGGCACC TTCGGACCGA ATGAAGTGGA CCAGACGTTT
GGACCGGACG TGCGCTACGT CAGCATTCCA AAGGACAATC CGCAGAACCA GTCGCCCGCG
GCGCTGCAGC AGTATTACGG TCGCGCCAAG ATCGACCCGA TCACGCGCAC GATGCACGTA
TCGCTGCACG ATCTCGACGG CAAATCGCTC TGGGAAGTGA AGCTCGATCC CGAGGCGTAG
|
|---|
| Protein sequence | MSDQPIFKPT RRTLIKGLVS ASGTALLSSR IGDVLAQGAA PAAMTSERLR PQVPGGVMSG
DITAGSAIVW SRTDRPARMI VEYSTDAAFK NVARRIGPAA LESNGLTARV DLNGLPAGAD
LFYRVRFQDL VHDKAFSEPV AGRFRTAPMQ ANRPICFVFS GDEAGQGWGI NERFGGYRLY
EAMRRESPDF FIHSGDQIYA DGPIQAEVKL PDGALWTNLV TEAKSHVAQT LDDYRGAFAY
NQLDKNKRAF SAEVPFLVQW DDHEVRNNWY PGQQIGPEEK RYQERSASLL AARAKQAMFE
YNPFRFNPID PEQIYRAFQY GPLLDVFMLD ERSYRGRNSP NRQTRLDADS AFLGPAQAAW
LKQSLKQSKA TWKVIASDMP ISLVVPDLNP DVPKGTYEAW ANADDGMPSG RELELAEILR
FIKQENIQNV VWVTADVHYA QATYYHPSRA KFTDFKPFWE FVGGPINAGT FGPNEVDQTF
GPDVRYVSIP KDNPQNQSPA ALQQYYGRAK IDPITRTMHV SLHDLDGKSL WEVKLDPEA
|
|---|
| |