Gene Rpic_0726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0726 
Symbol 
ID6286421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp760981 
End bp761826 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content64% 
IMG OID642624289 
Productthioredoxin 
Protein accessionYP_001898309 
Protein GI187927822 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3118] Thioredoxin domain-containing protein 
TIGRFAM ID[TIGR01068] thioredoxin 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0681266 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.772091 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACA TCACCTCGCA GAATTTCGCG CAGGAAGTGA TCGAAACCTC TCGCCAAATA 
CCGGTGCTGG TCGATTTCTG GGCGCCATGG TGCGGCCCGT GCCGCACGTT GGGCCCGATG
CTGGAAAAGC TGGAGGCCGA ATTTGCCGGC AAATGGAAGC TCGCCAAGAT CAACTCCGAC
GAAAACCCCG AGCTTTCCGC CCAGTTCCAC GTCCGCAGCA TCCCGTACGT GGTGGCGTTC
GTGGATGGCA AGCCGGTCGA CCAGTTCGTC GGCGTCTTGC CCGAAGCGCA ATTGCGCGCG
TTCCTCGACC GCGTGATTCC GCAGCCCGCA GAAGTCGCCT ATCGCGAAGG ACTGGCAGCG
AGCCAGGCCG GCGAAACCGC CCACGCGCGC GAAGCGTTCC AGAACGCGCT GGCCTTCGAC
CCGGGCTTCG ATGCCGCCCG CTTTGCGCTG GTGAACCTGC TGCTCGACAG CGGCGACGTG
CATGCCGCGC AAGACGAATT CGCATTGCTC TCGCCCAAGG CGCCGCAGGA TGAGCGCTAT
GCCCCGCTGG AAACGCGCCT GAGGGCCACC GAACGGGCCG ATACGCTACC CGATGCCGGC
GCCCTTCGCA CGGTCGTGGA AGCGCAACCG GACAACCTGC AGGCACGGCT CGACCTGGCA
CAGCAGTACA TCGCGGCACA AGACTACGAA GCCGCCCTGG AGCAATTGCT CGCCATCGTC
GAGCGGGATC GCGCCTTCCG TGACGACATT GCGCGCAAGA CGATGGTCTC GGTATTCGAC
ATGATGCGCG ACGCGCCGCA GGCGGTATCG CATTGGCGCA GGCAGCTGGC GTCCAAACTG
AATTGA
 
Protein sequence
MSDITSQNFA QEVIETSRQI PVLVDFWAPW CGPCRTLGPM LEKLEAEFAG KWKLAKINSD 
ENPELSAQFH VRSIPYVVAF VDGKPVDQFV GVLPEAQLRA FLDRVIPQPA EVAYREGLAA
SQAGETAHAR EAFQNALAFD PGFDAARFAL VNLLLDSGDV HAAQDEFALL SPKAPQDERY
APLETRLRAT ERADTLPDAG ALRTVVEAQP DNLQARLDLA QQYIAAQDYE AALEQLLAIV
ERDRAFRDDI ARKTMVSVFD MMRDAPQAVS HWRRQLASKL N