Gene Rpic_0686 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0686 
Symbol 
ID6289392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp724015 
End bp724800 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content63% 
IMG OID642624248 
Producttol-pal system protein YbgF 
Protein accessionYP_001898269 
Protein GI187927782 
COG category[S] Function unknown 
COG ID[COG1729] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR02795] tol-pal system protein YbgF 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.379534 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.398306 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACGA TGATGAAACA GCGCGCTTAT GGGGCCATGC GTCGGGCCAT CCTGATGGCG 
ACGCTCGTCG CGGGTGGCGC CCTCACCGTG GCCGGCCCGG CGGCAGCGGG GGTGTTTGAC
GACGATGAGG CGCGCCGCGC CATCATCGAC ATGCGCGACA AGTTCAACAA CTTCCAGTCG
ACGGCGGCCC AGCGCATCGA TCAGAACAGC AAGAACCTGA TCGACGCGCA AAACCAGATC
GAGACACTCA AATCCGAAGT GGCGCGCCTG CGCGGGCAGA ACGAAGTCCT GCAGAACAGC
GTCGATACGC TGACCAAGCA GCAAAAGGAT TACTACGCCG ACCTCGATGC GCGCCTGAAG
AAGTTCGAGC CGCAGCAAGC GACGGTGGAC GGTCGCGAAG GGATGGTCCA GCCGAACGAG
AAGCCGGAAT ACGACGCTGC GCTCAAGGCG TTCCAGGGCG GGGACTTCAA GGGCGCGGGC
AACCAGTTCT CGGCGTTCGT GAAGAAGTAT CCGCAAAGCC CGTATCTGCC GCTGGCGCAA
TTCTGGCTGG GCAACGCGCT CTATGCGCAG CGCGACTACA AGGGCTCGAG CTACGTGCTG
GAGAACATGG CGCGCAGCAA TCCGCAGCAT CCGAAGGCGC CCGATGCCCT GCTGCAGGTG
GCGACCAACC AGGGCGAGTC TGGTCAGAAG GCGGCCGCAC GCAAGACGCT GGAATCGGTG
GTCTCGCAGT ATCCCGGCAC CGAGCAGGCT AAGACCGCGC AAAGCCGTCT GAAGTCGATG
CGCTGA
 
Protein sequence
MNTMMKQRAY GAMRRAILMA TLVAGGALTV AGPAAAGVFD DDEARRAIID MRDKFNNFQS 
TAAQRIDQNS KNLIDAQNQI ETLKSEVARL RGQNEVLQNS VDTLTKQQKD YYADLDARLK
KFEPQQATVD GREGMVQPNE KPEYDAALKA FQGGDFKGAG NQFSAFVKKY PQSPYLPLAQ
FWLGNALYAQ RDYKGSSYVL ENMARSNPQH PKAPDALLQV ATNQGESGQK AAARKTLESV
VSQYPGTEQA KTAQSRLKSM R