| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0668 |
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| Symbol | |
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| ID | 6286499 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 707808 |
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| End bp | 708740 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642624230 |
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| Product | putative transmembrane protein |
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| Protein accession | YP_001898251 |
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| Protein GI | 187927764 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4966] Tfp pilus assembly protein PilW |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.983511 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.403292 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCCGCC TCTCTCATGC TCGGCGGGGC GCGACGCTTG TGGAGTTGCT GATCGGCACG
CTGGTCGGGC TGATCGTGCT TGGCATCGCG TTGCAACTGG CACTCCTGGC CCGTGCAAGC
TATCAGCGCG TTGCCGACAA TGCCCTGATC GAAAGCCGCG GCACGCAAGC ACTGGAACTG
CTGACAATGG CACTGCAGCA TGCAGGGTGG GCAACCGATA CGCCAGCAGC ATCGCCAGAG
CGCCGATGGC CAGACGCGAA GGCGACGCTA TCGATTCAAG GTGCGGACAG TTGCACCCCT
TCCGAAGCGG AAGTCCTTGG CTGCAACGGC AGTGGCATCC GAAACAGCGA TGCCGTGCTG
GTCCGCTTTG CAGGCCGTAG CATGCATACC AACTCGCAGC GAGCTGACGA CAGCATCATC
GATTGCTCCG GCTACGGGGT CGCTGAGCCC GTTCAAAACG GCAGCGACGG CCAGCGCGCG
GGATACATGC TGCTCTATCT CGCCCGAGCG ACGGATCAAG AACCGCAACT CATGTGCCGG
TCGCGAAGGC ATCAAGCCGG TCAGACTGTG GCGGGCCGAT GGACATCCAA TGGCATGGTC
CGCGGCGTCG AAACAATGCA GCTTCTGTAT GAGGTTCGCA CCGCTGGCGG CACCTCAAGC
ACGACACTGT CCGCGCGCTC GCTGACCACC GAGCAATGGC GCCGGGTTCA AGCCGTGCAC
ATCGCGCTGG TCGTTCGCGG CGACTACAAC ACGCCCAGGT CAGCCACCAA GACCACGGCC
ACACTCGCGC TATTTCCCGA CCTCCAGCGA GTTGAAGGCG CCAACGCACA GGACTTGGAG
TTCACGCCAA CCGAAACCCA ACGCCGTCGT GCCGTTTTCA CTGCAACGGT ACGCTTGCGC
AATCCGCTCG CCTGCGACGT GGACGTATGT TGA
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| Protein sequence | MCRLSHARRG ATLVELLIGT LVGLIVLGIA LQLALLARAS YQRVADNALI ESRGTQALEL
LTMALQHAGW ATDTPAASPE RRWPDAKATL SIQGADSCTP SEAEVLGCNG SGIRNSDAVL
VRFAGRSMHT NSQRADDSII DCSGYGVAEP VQNGSDGQRA GYMLLYLARA TDQEPQLMCR
SRRHQAGQTV AGRWTSNGMV RGVETMQLLY EVRTAGGTSS TTLSARSLTT EQWRRVQAVH
IALVVRGDYN TPRSATKTTA TLALFPDLQR VEGANAQDLE FTPTETQRRR AVFTATVRLR
NPLACDVDVC
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