Gene Rpic_0544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0544 
Symbol 
ID6289702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp583397 
End bp584179 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content62% 
IMG OID642624109 
Productextracellular solute-binding protein family 1 
Protein accessionYP_001898131 
Protein GI187927644 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0725] ABC-type molybdate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACTC TGTTCCTGAA ACTCTGCGCA GCCGCGCTCG TCGCAACCTC GGCAGCTGCA 
GCTCACGTCC AGGCTGCCGA GCTGCACGTC ATGAGCTCCG GTGGCTTTAC CGCCGCCTAT
AAAGTGCTCG GGCCGAAGTT TGCAGCGCAG ACGGGCAACA CGCTCAACAC CGCGCTTGGA
CCGTCGATGG GCAAGTCGCC CGAAGCGATT CCGAATCGGC TTGCGCGCGG CGAGCCAGCG
GACGCCGTCA TCATGGTCGG CTACGCACTC GACGATCTGA TCAAGCAAGG CAAGGTCATC
CCGGAATCGC GCGTGGAACT TGCCGATTCG CGCATCGGCA TGGTGGTTCG CGATGGCGCA
GCAAAGCCCG ACATCAGCTC GCCTGAGGCC CTCATGCAAG TGCTGCTGCA TGCCAAGTCG
ATTGCCTACT CGGACAGCGC AAGCGGCGTG TATATCGAGC GCGAGTTGTT CAAGAAGCTC
GGCATTGAAG AGCAGGTCAA GGCGAAGGCG AAGATGATTC CGCGCATTCC GGTGGCGTCG
GTGGTGGCCA CGGGCGACTA CGAGATCGGT TTCCAGCAAG TCAGCGAGTT GCTGCCGGTG
CAGGGCGCCA CCTTTGTCGG AAAGATTCCG GAGTCGCTGC AGTCGGTCAC ACGCTTTGCG
GCGGGCATTC CCGTTGGGGC ACCGCATCCG AAGGAAGCCA AGGCGCTTCT CGACTATCTT
GCTTCGCCCG GCGCTCAGGC AGACGTGAAA TCGACTGGCC TCGATTCGGT ACTTGCGCGT
TGA
 
Protein sequence
MKTLFLKLCA AALVATSAAA AHVQAAELHV MSSGGFTAAY KVLGPKFAAQ TGNTLNTALG 
PSMGKSPEAI PNRLARGEPA DAVIMVGYAL DDLIKQGKVI PESRVELADS RIGMVVRDGA
AKPDISSPEA LMQVLLHAKS IAYSDSASGV YIERELFKKL GIEEQVKAKA KMIPRIPVAS
VVATGDYEIG FQQVSELLPV QGATFVGKIP ESLQSVTRFA AGIPVGAPHP KEAKALLDYL
ASPGAQADVK STGLDSVLAR