| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0338 |
|---|
| Symbol | |
|---|
| ID | 6287599 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | + |
|---|
| Start bp | 358663 |
|---|
| End bp | 360102 |
|---|
| Gene Length | 1440 bp |
|---|
| Protein Length | 479 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642623905 |
|---|
| Product | Na+/solute symporter |
|---|
| Protein accession | YP_001897928 |
|---|
| Protein GI | 187927441 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0591] Na+/proline symporter |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGATCT GGTTTGTCAT TGTTTACTGG GTGATTTCGG TCGGGATCGG CCTGTGGGCT
GCACTGCGCG TGCGCAGTAC CGCCGACTTC GCCGTGGCTG GCCGCAGTCT GCCGTTCTAC
GTCGTGACCG CCACGGTGTT CGCCACCTGG TTCGGCTCCG AGGCGGTGCT CGGGATTCCC
GCGGAATTTC TCAAGGATGG CCTGCACGGT GTGGTGGCCG ATCCGTTCGG TTCGTCGCTG
TGCCTGGTGT TGGTGGGTCT GTTCTTTGCC AAGCCGCTGT ACCGGATGAA CCTGCTCACC
ATTGGTGACT TCTATCGCAA CCGCTTTGGC CGCGTGGCCG AAACGCTGAC CACCCTGTGC
ATCGTCGTAT CGTACCTGGG CTGGGTGGCA GCGCAGATCA AGGCGCTGGG GCTGGTGTTC
TACACCGTGT CTGACGGCGC GGTTTCGCAA GACCTCGGGA TGATGATCGG CGCGGGCAGC
GTGCTGGTCT ACACGCTGTT TGGCGGCATG TGGTCGGTGG CGGTGACGGA TTTCATCCAG
ATGATCATCA TCGTGATCGG CATGCTGTAC ATTGGCTGGG AAGTGTCGGG CCAGGCCGGT
GGTGTGGGCG CGGTGGTGGC GCACGCCGCG GCTTCGGGCA AGTTCTCGTT CTGGCCGGCG
TTCAACCCGA TCGAGGTCAT CGGCTTTGTG ACGGCGTGGA TCACCATGAT GCTCGGCTCG
ATCCCACAGC AGGACGTGTT TCAGCGGGTA ACGTCATCGC GCACCGAGCG CATCGCCGGT
ACGGCGTCGG TGCTGGGCGG CGTGTTGTAC TTCATGTTTG CGTTCGTGCC GATGTTCCTA
GCGTATTCGG CCACGCTCAT CGACCCGGAG ATGGTCGCGA AATACATCGA TACCGATTCG
CAGATGATCT TGCCGAACCT GGTGCTGCAG CATGCGCCGA TCTTCGCGCA GGTGATGTTC
TTCGGTGCGC TGCTCTCAGC CATCAAGAGC TGCGCGAGCG CGACGCTGCT GGCGCCCTCC
GTGACGTTCG CCGAAAATGT GCTGCGTCCG CTGCTGCCCA ACATGGACGA CAAGCGTTTC
CTGCGCGTGA TGCAGGCAGT GGTGCTGACG TTCACGGTCT TGGTGACGCT CTTTGCGCTG
AACTCGCATC TGTCGATCTT CCACATGGTC GAAAGCGCCT ACAAGGTGAC GCTGGTGGCC
GCGTTCGTGC CCTTGGCCTT TGGCCTGTTC TGGAGGCGCG CGACCAAGCA GGGCGGTCTG
TTGGCCATCA TCCTGGGCCT CGCGGCGTGG ATCTGGTGCG AAGCGTTCCA GCCGAATGCG
ATGCTCCCGC CACAATTGGT TGGCCTCCTT GCCAGCTTTG GCGCGATGGT CCTGGGCTCT
CTCGGACCAC AGTGGATCGC GAACCGCGCG CCGACCACCA AGGCGGTCAC GCAAGCCTGA
|
|---|
| Protein sequence | MLIWFVIVYW VISVGIGLWA ALRVRSTADF AVAGRSLPFY VVTATVFATW FGSEAVLGIP
AEFLKDGLHG VVADPFGSSL CLVLVGLFFA KPLYRMNLLT IGDFYRNRFG RVAETLTTLC
IVVSYLGWVA AQIKALGLVF YTVSDGAVSQ DLGMMIGAGS VLVYTLFGGM WSVAVTDFIQ
MIIIVIGMLY IGWEVSGQAG GVGAVVAHAA ASGKFSFWPA FNPIEVIGFV TAWITMMLGS
IPQQDVFQRV TSSRTERIAG TASVLGGVLY FMFAFVPMFL AYSATLIDPE MVAKYIDTDS
QMILPNLVLQ HAPIFAQVMF FGALLSAIKS CASATLLAPS VTFAENVLRP LLPNMDDKRF
LRVMQAVVLT FTVLVTLFAL NSHLSIFHMV ESAYKVTLVA AFVPLAFGLF WRRATKQGGL
LAIILGLAAW IWCEAFQPNA MLPPQLVGLL ASFGAMVLGS LGPQWIANRA PTTKAVTQA
|
|---|
| |