| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0305 |
|---|
| Symbol | |
|---|
| ID | 6289720 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 321715 |
|---|
| End bp | 324147 |
|---|
| Gene Length | 2433 bp |
|---|
| Protein Length | 810 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642623873 |
|---|
| Product | MMPL domain protein |
|---|
| Protein accession | YP_001897896 |
|---|
| Protein GI | 187927409 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4258] Predicted exporter |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGCT TGCACGCCCT GCGTCGCCCT GCGGTGCTGG TCTGGTTGAC TGGCCTGCTG
CTGTGCGCGG TCGTGATCGG ACGTACCAGC TTTACGGCGG ACCTGTCGGC GTTTCTGCCG
CGCTCGCCGA GTGCCGAGCA ACGCGTGCTC GTCGACCAGT TGCGCGAGGG GCTCGTGTCG
CGCCTCATCC TCGTCGGCAT CGACGGTGGT GACGCGGCCA CCCGTGCAAC GCTGTCAAAG
CAGCTCGCTG CGAGGCTGCG TGCCGACGCG CAATTCAGCG CCGTCAACAA CGGTGAGCCC
GTGAGCGAAG CGCGCGACCG GCAGTTCATC TTCGACCACC GCTACGTGCT GAGCCCCGCA
GTCACGCCGC AGCGCTTTTC CGCCGAAGGG CTGCATGCGG CGCTGGGCGA AAGCCTCGAT
CTGTTGAGTT CATCGGCAGG GCTCGTCGCC AAGAACATGC TGCCGCGTGA CCCGACCGGC
GAGGTGGCGG CACTCGTCAG CCAGCTCGAC AACACCGCGC TGCCGTCGTC GAAGCACGGC
GTGTGGGCGT CACGCGATGG CCAGCGTGCC GTGCTGGTCG TGCAGACAAC GGCCGCCGGC
TCCGACACCG ACGCACAGGC GCATGCCATT GATGCCGTGC GCGGCGCGTT CGATGCGGTT
GCGCGCGCAG TGCCAAACGC AGCGTCAACG CGCATCCTGA TGACCGGCCC GGGCGTGTTC
TCCGTCGAAT CGCGCGACAC CATCAAGCAC GACGTCGAGC GGCTTTCCGC CGTCAGCCTC
GTGCTGGTGG TGGCGTTGCT GCTGACGGTA TACCGCTCGC CGCGCACGAT GGTGCTCGGG
TTGCTGCCGG TGCTGTCCGG CGTGGCGGCA GGCGTGGCAG CGGTCAGCCT CACGTTTGGC
GCGGTGCACG GGCTTACGCT CGGCTTCGGC ACCACGCTCA TCGGCGAGGC GGTCGACTAT
TCGATCTACC TGTTCGTGCA ATCCGCCCGC CTGCACGGCG CCACTCCCCA CGACAGCCTG
CGCGCATGGA TTGCCACGTA CTGGCCGACC ATCCGCCTGG GTGTGCTGAC CTCGGTGTGC
GGCTTTGCGT CGATGCTGTT CTCGGGCTTT CCCGGCCTGG TGCAACTGGG GCTGTATTCG
ATTGTGGGGT TGGTAACGGC CGCGCTCGTC ACGCGCTACG TGCTACCGCA TCTGCGTGGT
GCAGAAGTGG CGACGCGTGA TCTCTCGCGC GTGGGAGCGT GGCTGACGCG GGCGACGTCT
GCCGCACCGC GCCTGCGCTG GCTGTTGGCC GCCGTGCTCA TCGGCGCATG TGCGGCGCTT
TCGCTGCATC GCGATAGCTT GTGGAGCCGC GAACTCGCCG CGTTGAGCCC CGTGCCGGCG
AAAAGCCAGG CGCTCGACGC CAGCCTTCGC GCAGATGTGG GCGCGCCCGA CGTGCGATAT
CTGGTGGTGA TCCCGGCAGC AACGGAACAG GCCGCGCTCG AAGGCGCCGA GAAGATCGCC
ACGCAACTGC AACCGCTCGT GGACAACGGC GTGCTCGCCG GCTTCGAGAA TCCCGCGCGC
TACCTGCCGA GCGATGCCAC ACAGCGCGCG CGCCTCGCGA GCTTGCCGGC GGCCGATGCA
CTGGCCACAC GCATGCGCAG CGCGGTGGAA GACCAGCCGA TCCGCGTAAA ACCCGATCTC
TTCGCCCCGT TCATCGCCGA TGTGGACGCG GCACGCGCGC AGCCCTTTTT GCGGCGCGCA
GACCTGAAGG GCACGTCGAT GGCATTGGCG GTGGATGCAC TGCTAACAGA ACACGCCGGC
CAGTGGAACG CCATGTTGCC ATTGCGCGCA CCACCAGATG CACCATCCGC CGCGCCGGCT
ACCACGAATA ACGCATCCAA TCCGCCCAGC CTCGATGCCG CGCCGATTCG CGCAGCCGTT
GAGCATGCGA CCGTACCCGG GGCGCTCTTC GTCGACATGA AGGTCGAAGC CGATCGGATG
TACGTGAACT ACGTGCGCGA AGACCTTCGC CTCTCGCTTG CCGGTTTTGC GGCGATCGCG
TTGCTGCTGA TCGTGGCGCT GCGCTCGCCG CAGCGGACCT TGCGGGCGTT GGCGCCCCTG
GTGGCGGCGG TGCTGGTGGT GACGGCCGGC TTTGCACTGG CGCGCGTGCC GCTGACCATC
CTGCATCTGG TCGGCATGCT GCTGATCGTG GCGGTGGGAT CGAACTACGC GCTGTTCTTC
AATCAACGCG CACAGGCCAT TGCGCCGCAG ACCCTGGTGT CACTGCTGGT GGCCAACCTG
GCGACGGTGG CCGGCTTCGG CCTGCTCGCG CTCTCTCGCG TGCCGATGCT CGAAACCTTC
GGGCTGACCG TCGGCCCGGG CGCCATGCTT GCGCTGTTGT TCGCCGCCAT CCTCGCGCCA
CGCGCCAATC ACGATCAGCA CGCCACAGCA TGA
|
|---|
| Protein sequence | MKRLHALRRP AVLVWLTGLL LCAVVIGRTS FTADLSAFLP RSPSAEQRVL VDQLREGLVS
RLILVGIDGG DAATRATLSK QLAARLRADA QFSAVNNGEP VSEARDRQFI FDHRYVLSPA
VTPQRFSAEG LHAALGESLD LLSSSAGLVA KNMLPRDPTG EVAALVSQLD NTALPSSKHG
VWASRDGQRA VLVVQTTAAG SDTDAQAHAI DAVRGAFDAV ARAVPNAAST RILMTGPGVF
SVESRDTIKH DVERLSAVSL VLVVALLLTV YRSPRTMVLG LLPVLSGVAA GVAAVSLTFG
AVHGLTLGFG TTLIGEAVDY SIYLFVQSAR LHGATPHDSL RAWIATYWPT IRLGVLTSVC
GFASMLFSGF PGLVQLGLYS IVGLVTAALV TRYVLPHLRG AEVATRDLSR VGAWLTRATS
AAPRLRWLLA AVLIGACAAL SLHRDSLWSR ELAALSPVPA KSQALDASLR ADVGAPDVRY
LVVIPAATEQ AALEGAEKIA TQLQPLVDNG VLAGFENPAR YLPSDATQRA RLASLPAADA
LATRMRSAVE DQPIRVKPDL FAPFIADVDA ARAQPFLRRA DLKGTSMALA VDALLTEHAG
QWNAMLPLRA PPDAPSAAPA TTNNASNPPS LDAAPIRAAV EHATVPGALF VDMKVEADRM
YVNYVREDLR LSLAGFAAIA LLLIVALRSP QRTLRALAPL VAAVLVVTAG FALARVPLTI
LHLVGMLLIV AVGSNYALFF NQRAQAIAPQ TLVSLLVANL ATVAGFGLLA LSRVPMLETF
GLTVGPGAML ALLFAAILAP RANHDQHATA
|
|---|
| |