Gene Rpic_0241 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0241 
Symbol 
ID6288318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp255967 
End bp257151 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content67% 
IMG OID642623811 
Productsignal recognition particle-docking protein FtsY 
Protein accessionYP_001897835 
Protein GI187927348 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0552] Signal recognition particle GTPase 
TIGRFAM ID[TIGR00064] signal recognition particle-docking protein FtsY 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAGTT TCTGGAAAAA GCGCAAGGCA GAGCCGCAAC CGGCCGCCGA ACCCACGCCC 
GCAGCGGCGC CCGAAGCCGC GCAGGCGCCT GCCCCGGCTG CCATCCCCGG CCCCGCTCCC
GTTCCCGCCC CGGTTGCCGC ACCCCAGCCC GTCGCTGCAC CTGCTCCCGG ACCTGTCGCT
GCGCCGGTCC ACACTGCCGT GCCGGATGCG CCTGCCGTGC AGCCTCCACT CGACATGCAA
ACCGACGATA TCGAAACCGT GCCGACGCCT GCTGTGATCG AGCAGGCGCG CAAGGGCTGG
ATGTCACGCC TGCGCTCCGG CCTGTCGAAG ACGAGCAAGG GCCTGACCAC GCTGTTCGTG
GGCGTGAAGG TGGACGAAGC GCTGTTCGAA GAGCTGGAGA CCGCCCTGCT CATGGCCGAC
GCCGGAGTCG ACGCCACCGA ATACCTGCTC GGCGAACTGC GCCGCCGCAT CAAGGCACAG
CGTATCGAAA CCGCCGAAGG CGTGAAGACC GCCCTGCGTG ACCTGCTGGT CGAGCTGCTG
CACCCCTTGG AAAAAACCAT GGTGCTCGGC CGCGAGCAGC CGATGGTGAT CATGATCGCG
GGCGTGAACG GCGCCGGCAA GACGACCAGC ATCGGCAAGC TGTGCAAGCA CTTCCAGACC
TACGGTCAAT CGGTGCTGCT GGCCGCAGGC GACACGTTCC GTGCCGCCGC GCGCGAGCAA
CTCGTGATCT GGGGACAGCG CAACAACGTC ACGGTCGTGG CGCAGGAATC GGGCGACCCC
GCCGCCGTGA TCTTCGATGC AGTAAACGCC GCACGCGCAC GCGGCATCGA CATCGTCATG
GCGGACACCG CTGGCCGCCT GCCGACGCAG CTGCACCTGA TGGAAGAGCT GAAGAAGGTG
CGCCGCGTGA CCGCCAAGGC GATGGCCACG GCGCCGCACG AAACGCTGCT GGTGATCGAC
GGCAACACGG GGCAGAACGC CCTCGCGCAA GTCAAAGCCT TTGACGAAGC GCTGGGCCTC
ACGGGCCTGA TCGTCACCAA GCTGGACGGC ACCGCCAAGG GCGGCATCCT GGCCGCCATC
GCGCGGCAGC GGCCGGTGCC GGTGTACTTC ATCGGCGTGG GCGAGCAGGT TGAGGACCTG
CAGCCGTTTT CCGCGCGCGA ATTTGCGGAT GCGTTGTTGG GTTGA
 
Protein sequence
MFSFWKKRKA EPQPAAEPTP AAAPEAAQAP APAAIPGPAP VPAPVAAPQP VAAPAPGPVA 
APVHTAVPDA PAVQPPLDMQ TDDIETVPTP AVIEQARKGW MSRLRSGLSK TSKGLTTLFV
GVKVDEALFE ELETALLMAD AGVDATEYLL GELRRRIKAQ RIETAEGVKT ALRDLLVELL
HPLEKTMVLG REQPMVIMIA GVNGAGKTTS IGKLCKHFQT YGQSVLLAAG DTFRAAAREQ
LVIWGQRNNV TVVAQESGDP AAVIFDAVNA ARARGIDIVM ADTAGRLPTQ LHLMEELKKV
RRVTAKAMAT APHETLLVID GNTGQNALAQ VKAFDEALGL TGLIVTKLDG TAKGGILAAI
ARQRPVPVYF IGVGEQVEDL QPFSAREFAD ALLG