Gene Rpic_0177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0177 
Symbol 
ID6288871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp196922 
End bp197383 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content63% 
IMG OID642623748 
Producthypothetical protein 
Protein accessionYP_001897772 
Protein GI187927285 
COG category[S] Function unknown 
COG ID[COG5445] Predicted secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.967448 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCC GCCTCGCAAT CGCTTTCTCC CGTCACACCC TGGTGGCCCT GGTGGCCACA 
GTTTCCGCTT CCGCCGCTCT GCTATCGGCC CAGCCGGCAG CTGCAGCGGT CCAAAGCAGC
GCCGATCCGT ACACGCAAGG CGCCGTTGCC AAGGCTGACC CCTACACGCA GGGTGCTGCC
GCCAAGTACG ACGTCTATAC CCAGGGTGCG GACCGTCAAG CTGATACCTA CGGCTATCTG
TCGTGGAAGA ACGATCGCTT CGATCCGTAC ACCCAAGGTG CCGTCGGCAA GGCTGATCCA
TACACCGATG GCGCCATCGC CAAGGCTGAT CCGTACACCG ACGGCGCTGC TGCCAAGTAC
GACGTCTACA CGCAGGGTGC CGATCGCCAG GCCGACACCT ACGGCTATCT GTCGTGGAAC
GGCGATGCCT CGTATCCGAA GGACGCCGCT TCGCAAGCCT GA
 
Protein sequence
MNTRLAIAFS RHTLVALVAT VSASAALLSA QPAAAAVQSS ADPYTQGAVA KADPYTQGAA 
AKYDVYTQGA DRQADTYGYL SWKNDRFDPY TQGAVGKADP YTDGAIAKAD PYTDGAAAKY
DVYTQGADRQ ADTYGYLSWN GDASYPKDAA SQA