| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0172 |
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| Symbol | |
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| ID | 6286508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 189255 |
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| End bp | 190520 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642623743 |
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| Product | VanZ family protein |
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| Protein accession | YP_001897767 |
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| Protein GI | 187927280 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5652] Predicted integral membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGGCA TCGGACGCTA TGATGGACGG CTTTTTCCGG CCACGTCCGC TCCTCTTTCT
AGCTCGCTCC TTCCGGTGAC GGACTTCCAC TCGCAACCCG CTGCACCCAC CCAGCATCGC
CACTCGCCGC TTGCGCGCGC CGGGCTGGGG TGGTTCGTGC TGCTGGTCGT CTACGCAAGC
CTGTATCCGT TTGCCGGCTG GACAGACACC GGCGTGTCGC CGTTCGCCTT CCTGAGCGCA
CCGCTGCCGC GCTACAACAC CGCCTTCGAC ATGCTCACCA ACGTGTGGGG CTACATGCCG
CTGGGCATGC TGACGGTGCT GGCGCTGCAT CCACGCATCA CCGGCTGGCG CGCGGTCTTG
CTGGCGCTGC TGGCGGGGTT GCTGCTCTCC GGCGCGATGG AGGCGATCCA GACCTATCTG
CCCACGCGCG TGTCCTCCAA TGTCGATCTG GCGACGAACA CGCTGGGCGC CTTGCTGGGC
GGCCTCGTCA TGTTGCCTTT TGCGGCGCGG CTGATCGACC GCGGCGGGCT GCGCCGCCTG
CGCCGCCGGT GGTTCGAGCC ACATGCGACC TTTGCCATCC TGCTGATGCT GGTGTGGCCG
TTCGCACAGA TTTTTCCGCA GGAATTCCTC TTCAGCATGG GCGGAGTGAT CCGCAGCATC
CTGCTCGATC CATCGCCGGA TGCGTTTGTG GTCAACCTCG TCAACGGCTG GTTTCCGGAG
CTGTTCGACT GGCAGGACAA GCTGACGGCG CACCCGGAAG CACTGCAGCG CCAGGAACTG
CTGGAAGCGC TCATCACCGC CTGCAGCTGG ATCGGCACGG GGCTGCTGGC CAGCGTGGCC
ATGCGCAGCG GTGCGCCCAT GCTGCGCCTG CTGGCTGCGC TGCTGGCCGG CGCGCTGCTG
GTCAAGGCGG GGGCGACGGT GCTGCAGTTT CCGCTGGGCG GCGCGTGGGA CTGGCTTTCG
TCCGGCGCGC GTTTCGGGTT GATTGTCGGC TCGCTGGTGC TCGTGCTGCT GGTGCGGCTG
CCGCGCTGGT TGCGCGGCGC GCTGGCCATG ACGCTGCTGA TTGCGCTGAT CATCCTGTCC
AACGTGCTGC CGCCGAGCCC GTATTCGTGG GTGTCGGCGC AAAGCTGGCG GCTGGGGCGC
TTCGTCCATT TCAACAGCCT GTCGCAATGG ATCGGCTGGC TGTGGCCGTT TCTGGGCCTC
GGCTATCTCG CCTGGCGCGC CGAGCAGACG CAGCTGCAGC GGCGCGCCGG ACGTCACGCG
CGTTGA
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| Protein sequence | MRGIGRYDGR LFPATSAPLS SSLLPVTDFH SQPAAPTQHR HSPLARAGLG WFVLLVVYAS
LYPFAGWTDT GVSPFAFLSA PLPRYNTAFD MLTNVWGYMP LGMLTVLALH PRITGWRAVL
LALLAGLLLS GAMEAIQTYL PTRVSSNVDL ATNTLGALLG GLVMLPFAAR LIDRGGLRRL
RRRWFEPHAT FAILLMLVWP FAQIFPQEFL FSMGGVIRSI LLDPSPDAFV VNLVNGWFPE
LFDWQDKLTA HPEALQRQEL LEALITACSW IGTGLLASVA MRSGAPMLRL LAALLAGALL
VKAGATVLQF PLGGAWDWLS SGARFGLIVG SLVLVLLVRL PRWLRGALAM TLLIALIILS
NVLPPSPYSW VSAQSWRLGR FVHFNSLSQW IGWLWPFLGL GYLAWRAEQT QLQRRAGRHA
R
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