| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0109 |
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| Symbol | |
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| ID | 6286549 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 128330 |
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| End bp | 129916 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642623680 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001897704 |
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| Protein GI | 187927217 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGAAG CCACGCCAGA CACCGCGCTT GAAGCCAACC TGCTGAACCG GGTGACGTTG
GGCGATACGT TGCATCGCAG TGCGCGCAAG TTCGGCGCGA AGGTCGCGCT GGTCGATGGC
GCCCGCCGCA TGACGCATGG CGAACTCAAC GCAGACAGCA ATCGCTACGC GCACGCGCTG
CTTGCAAGCA GCCTCAAGCC CGGCGACAAG GTGGCGATGG TGTGTGGAAA CTCTGCGCAG
TTCCTGGTGG CCGCGTACGG CATTCTCAAG GCGGGACTGG TGTGGGTGCC GATCAACGCG
ATGCTCGGGC CGGAAGACGT GCGCTACATC CTCGAACATG CCGAGGCGCG GCACGTGGTG
ATCGACGCGG CGCTGTACCC GGCGCTGCGC GACACGCTGG CGACGCTCGG GCTCCCGGCG
CACCAATGCT TCGGTGAACC GGTTGCCGAC GGGCCGCAAC CGGTGGAGCA AGCGCTGCAA
GGCCACGCGG ACACGCTGCC CGCTGTGGTG ATCGACGATC GCGATCTCGC GCTCATCATG
TACACCAGCG GCACGACCGG CCGACCAAAG GGCGCGATGC ATTCGCACCG CTCGGTGCAT
GCCGCGCTGA TGTCCAACGT CGCCGGCCTG AATCTGAATG AGACCGACGT GTTCTCGTGC
CTGCTGCCGA TGTTCCACTG CGCGCAGTTT GCAACGGCCG CGTCCGCGAT GATGGTGGGC
GCCACGCTTG TCATCCAGCG CGGCTTTGAT CCGGCGGCGC TGCTCGATGT GATTGCCAAC
GAACGCATCA CGCAGCTGTT CGGCTTGCCG CTCATGTACG CCGCGCTGCT GCATCATCCG
CTGCGTGCGC AGCGCGATCT CTCAAGCCTG CGCCTGTGCC TCTATGCGAT GGCGCCGATG
GCCAGGCCCC TGCTCGAACG CCTGATTGCC GAGGTGTGCC CCAACTTTGC CCTCGGCTCC
GGGCAGACCG AAATTTTTCC GATGACGATG TACTTCGCGC CTGACCAGCA ACTGCAGCGC
ACCGGCAACT ATTGGGGGCA GCCGTGCATG GTGAACGAAG CAGCGGTGAT GGACGATCAA
GGCAATCTGC TCGGCCCGAA CCAGTTGGGC GAGATCGTGC ACCGCGGCCC GAACGTCATG
CTCGGCTACT ACAAGGACCC GCAGGCCACG GCCAATGCGC GCCGCTTCGG CTGGCACCAC
ACGGGCGACC TCGGCATGTG GGATGCCGAC GGCCAGCTTC AGTTCAAGGA CCGCATCAAG
GACATGATCA AGACCGGCGG CGAGAACGTC CCTTCGGTCA AGGTGGAAGA AGTGTTGCTA
CGGCACCCGG CCGTGGCGAA TGCGGCAGTG GTCGGCTTGC CGCACGCGCA CTGGGTGGAA
GCGGTGGCCG CATTCGTCTG CCTCAAGCCC GATGCTCACG CCGATGCCGC CGCGTTGCAG
GCGCATTGTC GGGCGCATCT CGGCAGCTTT GAGGTGCCCA AGCACATCGC CGTGGTCGAC
AAGCTGCCCA TGACGGCGAC CGGCAAGATC CAGAAACACG TGCTGCGCAG CGCCAACCAG
ACGCTGTTCG AGGGCGAGGC CCGCTAA
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| Protein sequence | MSEATPDTAL EANLLNRVTL GDTLHRSARK FGAKVALVDG ARRMTHGELN ADSNRYAHAL
LASSLKPGDK VAMVCGNSAQ FLVAAYGILK AGLVWVPINA MLGPEDVRYI LEHAEARHVV
IDAALYPALR DTLATLGLPA HQCFGEPVAD GPQPVEQALQ GHADTLPAVV IDDRDLALIM
YTSGTTGRPK GAMHSHRSVH AALMSNVAGL NLNETDVFSC LLPMFHCAQF ATAASAMMVG
ATLVIQRGFD PAALLDVIAN ERITQLFGLP LMYAALLHHP LRAQRDLSSL RLCLYAMAPM
ARPLLERLIA EVCPNFALGS GQTEIFPMTM YFAPDQQLQR TGNYWGQPCM VNEAAVMDDQ
GNLLGPNQLG EIVHRGPNVM LGYYKDPQAT ANARRFGWHH TGDLGMWDAD GQLQFKDRIK
DMIKTGGENV PSVKVEEVLL RHPAVANAAV VGLPHAHWVE AVAAFVCLKP DAHADAAALQ
AHCRAHLGSF EVPKHIAVVD KLPMTATGKI QKHVLRSANQ TLFEGEAR
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