Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0020 |
Symbol | |
ID | 6287368 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 31486 |
End bp | 32223 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642623593 |
Product | ABC transporter related |
Protein accession | YP_001897617 |
Protein GI | 187927130 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.983785 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCTCG TTGATCTCTG CGCCGTACAC AAGCATTACG GCAACAACCA CGTTCTCAAG GGCGTCGACC TGCGCGTGGA GGCCGGCCAG GTGGTCGCCA TCATTGGGCG CAGCGGCTCG GGCAAGAGCA CGCTGCTGCG GTCCATCAAC GGGCTGGAGG CGATTGACGA CGGCCAGATC GTGGTCGACA ACGCGGTGCT CCAGGGCTCG CAGGCCACGC CCGCGCGGTT GCGCGCGCTG CGCCTGAACG TCGGCATGGT GTTCCAGCAG TTCAACCTGT TTCCGCACCT CACAGCCGGC CAGAACGTGG CGCTGTCGCC CGTGGTGGTC AAGGGCATGA AGAAGGCCGA TGCCAACGAC CTCGCCCGTC AGATGCTCGT CAAGGTGGGC CTGGCCGAAA AGTTCGATGC GTACCCCGAC CAACTCAGCG GCGGCCAGCA GCAGCGCGTG GCCATTGCCC GCGCGCTCGC CATGCAGCCG AAGGTGTTGC TGTGCGACGA AATCACCTCC GCGCTGGACC CGGAACTGGT GAACGAGGTG CTGGCCGTGG TGAAGCAGCT CGCCGCCGAA GGCATGACGC TGATCATGGT CACGCACGAG ATGCGCTTCG CGCGTGACGT GGGCGATCAG CTCGTGTTCA TGCACCAGGG GTTGATCCAT GAAAGCGGGC CGGCCAAAGA GGTGTTTGCC AGCCCCAAGA CGGCGGAGCT GGCGGCGTTC ATTGGCGCGG TGCAGTGA
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Protein sequence | MPLVDLCAVH KHYGNNHVLK GVDLRVEAGQ VVAIIGRSGS GKSTLLRSIN GLEAIDDGQI VVDNAVLQGS QATPARLRAL RLNVGMVFQQ FNLFPHLTAG QNVALSPVVV KGMKKADAND LARQMLVKVG LAEKFDAYPD QLSGGQQQRV AIARALAMQP KVLLCDEITS ALDPELVNEV LAVVKQLAAE GMTLIMVTHE MRFARDVGDQ LVFMHQGLIH ESGPAKEVFA SPKTAELAAF IGAVQ
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