Gene Rpic_0020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0020 
Symbol 
ID6287368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp31486 
End bp32223 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content65% 
IMG OID642623593 
ProductABC transporter related 
Protein accessionYP_001897617 
Protein GI187927130 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.983785 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCTCG TTGATCTCTG CGCCGTACAC AAGCATTACG GCAACAACCA CGTTCTCAAG 
GGCGTCGACC TGCGCGTGGA GGCCGGCCAG GTGGTCGCCA TCATTGGGCG CAGCGGCTCG
GGCAAGAGCA CGCTGCTGCG GTCCATCAAC GGGCTGGAGG CGATTGACGA CGGCCAGATC
GTGGTCGACA ACGCGGTGCT CCAGGGCTCG CAGGCCACGC CCGCGCGGTT GCGCGCGCTG
CGCCTGAACG TCGGCATGGT GTTCCAGCAG TTCAACCTGT TTCCGCACCT CACAGCCGGC
CAGAACGTGG CGCTGTCGCC CGTGGTGGTC AAGGGCATGA AGAAGGCCGA TGCCAACGAC
CTCGCCCGTC AGATGCTCGT CAAGGTGGGC CTGGCCGAAA AGTTCGATGC GTACCCCGAC
CAACTCAGCG GCGGCCAGCA GCAGCGCGTG GCCATTGCCC GCGCGCTCGC CATGCAGCCG
AAGGTGTTGC TGTGCGACGA AATCACCTCC GCGCTGGACC CGGAACTGGT GAACGAGGTG
CTGGCCGTGG TGAAGCAGCT CGCCGCCGAA GGCATGACGC TGATCATGGT CACGCACGAG
ATGCGCTTCG CGCGTGACGT GGGCGATCAG CTCGTGTTCA TGCACCAGGG GTTGATCCAT
GAAAGCGGGC CGGCCAAAGA GGTGTTTGCC AGCCCCAAGA CGGCGGAGCT GGCGGCGTTC
ATTGGCGCGG TGCAGTGA
 
Protein sequence
MPLVDLCAVH KHYGNNHVLK GVDLRVEAGQ VVAIIGRSGS GKSTLLRSIN GLEAIDDGQI 
VVDNAVLQGS QATPARLRAL RLNVGMVFQQ FNLFPHLTAG QNVALSPVVV KGMKKADAND
LARQMLVKVG LAEKFDAYPD QLSGGQQQRV AIARALAMQP KVLLCDEITS ALDPELVNEV
LAVVKQLAAE GMTLIMVTHE MRFARDVGDQ LVFMHQGLIH ESGPAKEVFA SPKTAELAAF
IGAVQ