| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3983 |
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| Symbol | |
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| ID | 6282184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 4461074 |
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| End bp | 4462288 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642623569 |
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| Product | integrase family protein |
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| Protein accession | YP_001897593 |
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| Protein GI | 187925951 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCGCC TAGCCGTCCC GCTCACCGAA GCCCAAGTCC GCGCGCTCGA ACCGCGCGAC
ACCCGCTATT GCGTCGCAGA CGGCAATGGT CTCGTCATCG AAATCATGAC GACCGGCACC
AAGATCTGGC GCTTCCGCTA CACGCTGAAC GGCAAACGCC AACCGCTTGC CACCATCGGC
GACTACCGGA TGATCTCGCT GCGTGTCGCG CGCGCCAAGG CGCAGAAGTA TGCGGAGATG
GTCGCGCAAG GCATCTCGCC GGTCGCCACG GCGCGGCGCG ACCGCGGCGC GGAAAGCAAA
GCCGATATCC TGCGCGAAGC CGCCGAGCTT TATCTCGCAA CGGAAATGGC CGGCAAGTCG
GAGGAATACC GTCGCACCAC GCGGCGGGCG CTCGACAAAG ACGTCTTGCC CGCCATCGGC
CACATGCAAA TCAAAGCGGT GACCGCCGAC GACATCGTCG CGATATGCGA CCGAATCAAG
AGCCGCGGCT CGCCGAAAAT GGCGCTGCAT ACGCGCAACG TGGTGAAGCG TCTCTACGAA
TATCTGATCG CCCGGCAACT CGCATCCAGC AATCCGGCCG AGGTCGTGCC GGCGCGCTCC
ATCGCTACTT TCGACAGCCG CACCCGCGTG CTTTCCGGCG ACGAGATCGG CGCCATGTTC
CGCTCGATCG ATGCGTCGAA CATTCGCCGA CCCTTGAAGC TAGCGCTGCA CCTGCTGGTG
CTGACGATGG TGCGCAAGTC GGACCTGGTC GAATCGACGT GGGCCGAATT CAACCTGGAC
AAGGCGATGT GGACGATCCC CGCTGCGCGC CTGAAAAAAG ACCGCGATCA GCGCGTGCCG
CTTTCCCAGC AGGCCGTCTC GATGCTGCGC GAGCTCGACC ACGCCAAGGC CAGCCGAAAG
TTCGTATTCC CGAGCGTCAG AGGCGACGAT CGGCCGATCG CCAAAAGTAC GCTGAATCAG
GCGGTCAAGG CACTCGGTCT GGACGTGGAG CATTTCGTCC TGCATGACTT CCGGCGCACC
GCAACGGCGC ATCTGCGCAA GCTGATGCAG CCGTCAGACG CGCTCGACCA GAACACGGCG
ACGACGCCCG GGCATATCGC GCAAGGTGCG AGCGCGGAGA ATGCCGCGAA GCAGCGATGG
GTCATGCAGC GGTGGGCGGA TTTTGTGGAT GCGCAGATCG AAGGCACACG TAGAGGCTCG
ACCAGTACGC CTTGA
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| Protein sequence | MPRLAVPLTE AQVRALEPRD TRYCVADGNG LVIEIMTTGT KIWRFRYTLN GKRQPLATIG
DYRMISLRVA RAKAQKYAEM VAQGISPVAT ARRDRGAESK ADILREAAEL YLATEMAGKS
EEYRRTTRRA LDKDVLPAIG HMQIKAVTAD DIVAICDRIK SRGSPKMALH TRNVVKRLYE
YLIARQLASS NPAEVVPARS IATFDSRTRV LSGDEIGAMF RSIDASNIRR PLKLALHLLV
LTMVRKSDLV ESTWAEFNLD KAMWTIPAAR LKKDRDQRVP LSQQAVSMLR ELDHAKASRK
FVFPSVRGDD RPIAKSTLNQ AVKALGLDVE HFVLHDFRRT ATAHLRKLMQ PSDALDQNTA
TTPGHIAQGA SAENAAKQRW VMQRWADFVD AQIEGTRRGS TSTP
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