Gene Bphyt_3978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3978 
Symbol 
ID6282179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp4456812 
End bp4457282 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content67% 
IMG OID642623565 
ProductCheW protein 
Protein accessionYP_001897589 
Protein GI187925947 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGATGC TCTTCATCCT CTTCACGCTC GATAGCGAAC GGTACGTGAT CGACGCGACG 
CAGGTGGAGC GTCTGATGCC GCTCACGCCG CAGTCGCCGC CGAAGTCAAT CCCCGGCGCG
CCGTCGTGGG TCGCGGGCGT GCTCGATCAC GAAGGCGCGC CATTGCCGCT GATCGATCTG
CCGGCGCTCG CGCTCGGCCG TCCCGCCGCG CAATTGATGT CGACGCGCAT CGTGCTGGTG
CGCTATCCGC ATGCGGGCAC GACGCGCCTG CTCGCGCTGT TGCTGGAAGG CGCGACACGC
ACGATTCGAC TAGACGTGAC GGCGTTTAAC GATGCCGGCC TCGACATGCC GCACGCGCGC
TATCTCGGCC CGGTCGCGAG CGAAGCGGGC GGCCTCGTTC AATGGATCCG CGTCGAGCAT
CTGCTGCCCG ACGACGTGAA AGCGCTCCTC TTTCCCGAGG CGCACGCATG A
 
Protein sequence
MPMLFILFTL DSERYVIDAT QVERLMPLTP QSPPKSIPGA PSWVAGVLDH EGAPLPLIDL 
PALALGRPAA QLMSTRIVLV RYPHAGTTRL LALLLEGATR TIRLDVTAFN DAGLDMPHAR
YLGPVASEAG GLVQWIRVEH LLPDDVKALL FPEAHA