| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3945 |
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| Symbol | |
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| ID | 6284720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 4419303 |
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| End bp | 4420730 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642623532 |
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| Product | general secretion pathway protein L |
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| Protein accession | YP_001897556 |
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| Protein GI | 187925914 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3297] Type II secretory pathway, component PulL |
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| TIGRFAM ID | [TIGR01709] general secretion pathway protein L |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.61254 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGCACGC TGATCGTTCT ATTGCCGCCG CGTGACCCGG CGGTGCCATC GCAGGAATGG
CAACTGCCGG AGCTGCCGTT CGTGCTGCTC GACAAGTCGG GCCGCGCCCA GCGCACCGGC
CGGTCGGCGC TCGCGCTGCT GCCGCGCGCC TCCACCACGG TGCTGATGGT CGCCGCGCGC
GACCTGCTGA TGATGCCCGC CACACTGCCG CCACTGCGCG GCCCGCGGCT GCGTCAGGCG
CTGCCCAATA TCGTCGAGGA TCAACTGATC CAGGACCCGC AGACCTGTCA CATCGCCGTC
GACCCGAAAC CGCTCGCGGG CGGCCGGCAG CTGCTGGCGA TCATCGACCG CGGCTGGTTC
CGGTATATCT GCGAATCGTT CACCAACGCC GGCCATCGCA GCTTGCGCGC GGTGCCGGTC
ACACGCTGCC TGCCGCAGGC GGCCGCACTT GATGCCGATG TGCCCGCCGA AGTCGCGGAA
ACGGTGAATG CGGGTGAGCC GGCCATGGCA GGCGCGGCCG ACGTGGCGAC GTCGTTGCCG
GGCGTCGCGC CGGTGCTGAC GCCCGGCGTC GTGGCTGCGG TGCCGATGGT GGCCGCCGTG
CTCGGCGCCG TGGTGCAGAC CGCGCCCGCC CTGCTGCTCG AAGGCGTGAC AAACAGCGCA
GGCGAGCGCG GCGTGCCGCG CGTCGAACTG GCGATTGCAC GCGGAGTGCA AGGCGAAGGG
TTGGCAGTGC CTGCCAGCGC CGTGAACGCG ACGCTCAGCG CGCTCGCCGG GGCGGCGCCG
GTGTCGCTAC ACATGCTCAC CGAAGTGCCC GGCAACGAGC CGAGTCTCGC GCCGAATAGC
CCGGCACGGC TGGCTGCGTA CATCCACGGC GCCAGTCCGC TGCCGTTCGA ACAGCTCGCG
CGGCGCGCGC TGGAGTGCCG CTTCGACTTG TGCCAGTTCG AGTTCGCCTC GCAGCCGTGG
CGGCTCGACC GCGCGACGCT GCGGCGTCTG CGGCTGCCGG TGTTGCTCGC GGTCGGCGCG
CTGCTGGTTG CGATCATCGG CGCAAACGCG CAGTGGCTGA TGCTCGCGCG CCAACGCGAT
GCAATCAACA CGCAGATGAC CGAACTGCTG CTCAATACCT TCCCCAAAAC GACCGTCGTG
CTCGACGCGC CCGACCAGAT GTCGCGCCAG TTGCAGCAGC TGCGCGTCGC GGCGGGCGAA
CTGTCGCCGG ACGATTTTCT GCCGCTCGCC GATGGGCTCG CGCGCTCTCT GCCGCCGGTG
CCGGTCAACG GGATTGCCGC GCTCGACTAT CACGACCGGC GGCTCGACGT GAACTTCAAG
CCGGAGATCA AGCTCGATCC CGATTTCGCG AAGCGCCTGG CGCGTAACGG CCTGAGCGGC
GCGATCGACA GCAATACCGG CAAGTGGACC ATCAGGAACG GACAATGA
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| Protein sequence | MSTLIVLLPP RDPAVPSQEW QLPELPFVLL DKSGRAQRTG RSALALLPRA STTVLMVAAR
DLLMMPATLP PLRGPRLRQA LPNIVEDQLI QDPQTCHIAV DPKPLAGGRQ LLAIIDRGWF
RYICESFTNA GHRSLRAVPV TRCLPQAAAL DADVPAEVAE TVNAGEPAMA GAADVATSLP
GVAPVLTPGV VAAVPMVAAV LGAVVQTAPA LLLEGVTNSA GERGVPRVEL AIARGVQGEG
LAVPASAVNA TLSALAGAAP VSLHMLTEVP GNEPSLAPNS PARLAAYIHG ASPLPFEQLA
RRALECRFDL CQFEFASQPW RLDRATLRRL RLPVLLAVGA LLVAIIGANA QWLMLARQRD
AINTQMTELL LNTFPKTTVV LDAPDQMSRQ LQQLRVAAGE LSPDDFLPLA DGLARSLPPV
PVNGIAALDY HDRRLDVNFK PEIKLDPDFA KRLARNGLSG AIDSNTGKWT IRNGQ
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