Gene Bphyt_3910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3910 
Symbol 
ID6284710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp4379853 
End bp4381019 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content62% 
IMG OID642623497 
ProductExtracellular ligand-binding receptor 
Protein accessionYP_001897521 
Protein GI187925879 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0868538 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTCGG CATTGCGTTG GATCAGCGCG GCATTGGTCG CCACCGGAGT GAGCGCAGCA 
TGGAGCGGCC ATGCATTCGC GGACGTAAAA ATCGGCGTGA CCTTGTCGGC AACGGGCCCG
GCCGCGTCGC TCGGCATTCC GGAAAAAAAC ACGATTGCGC TGCTGCCTAA AGAGGTGGCG
GGCCAGAAGA TCGACTACAT CGTGCTCGAC GACGCCACGG ATTCCACCCA GGCGGTCAAG
AACACGCGCA AGCTCACGAG CGAAGATCAC GTAGATGCGC TGATCGGCTC GACCGTCGTG
CCGAATTCGC TGGCCATGAT CGACGTCGCC GCTGAAACCA CCACGCCCAT GATCTCCATG
GCAGCGGCGG CGAGCATCGT CGAACCGATG GATGCGAAGC GCGCCTGGGT CTTCAAGACG
CCGCAGAATG ACATTCTCAT GGCCACCGCG ATCGCGCAGC ACATGTCGAA CCACGGTGTG
AAGACGGTGG CCTTTATCGG TTTCTCCGAC GCATACGGCG AGAGCTGGTT CAAGGAATTC
GGCAAAGCCG CGGATCTCGC GAAGATCAAG GTCGTCGCGA ACGAGCGCTT CGCACGCAAC
GACGCATCGG TGACCGGTCA GGTGCTGAAG ATCATGTCGC AGAATCCGGA CGCGGTCCTG
ATCGCCGGCG CAGGCACACC GGCTGCGCTG CCGCAGAAAA CGCTCAAGGA ACGCGGCTAC
AAGGGCAAGT ACTATCAGAC GCACGGCGTC GCCAACAATG ACTTCCTGCG CGTGTGCGGC
AAGGATTGCG AAGGCACCTA TCTGCCGGCG GGTCCGTTGC TCGTCGCCGA ACAACTGCCC
GATTCGAATC CCGTGAAGAA GAGTGCGCTC GCCTATAAGC GCGCGTACGA AACCGCATAT
GGCGCCGGCT CGGTGTCCAC CTTCGGCGGC CACGCATGGG ACGCGGGCCT GCTGCTGCAA
CGCGCGATTC CGCAGGCGTT GAAGAAGGGG CAACCGGGCA CGCCTGCCTT CCGCGAAGCA
TTGCGGGCCG CGCTGGAAAG CACCAAAGAC ATGCCCGCGT CGCACGGCAT CTTCAACATG
AGCGCGAACG ACCATGCTGG TCTGGATCAG CGGGCGCGCG TGATGGTGGA GATTGTCGGC
GGCAAGTGGA AGTTGTCCGG CGACTGA
 
Protein sequence
MKSALRWISA ALVATGVSAA WSGHAFADVK IGVTLSATGP AASLGIPEKN TIALLPKEVA 
GQKIDYIVLD DATDSTQAVK NTRKLTSEDH VDALIGSTVV PNSLAMIDVA AETTTPMISM
AAAASIVEPM DAKRAWVFKT PQNDILMATA IAQHMSNHGV KTVAFIGFSD AYGESWFKEF
GKAADLAKIK VVANERFARN DASVTGQVLK IMSQNPDAVL IAGAGTPAAL PQKTLKERGY
KGKYYQTHGV ANNDFLRVCG KDCEGTYLPA GPLLVAEQLP DSNPVKKSAL AYKRAYETAY
GAGSVSTFGG HAWDAGLLLQ RAIPQALKKG QPGTPAFREA LRAALESTKD MPASHGIFNM
SANDHAGLDQ RARVMVEIVG GKWKLSGD