Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3910 |
Symbol | |
ID | 6284710 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 4379853 |
End bp | 4381019 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642623497 |
Product | Extracellular ligand-binding receptor |
Protein accession | YP_001897521 |
Protein GI | 187925879 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0868538 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTCGG CATTGCGTTG GATCAGCGCG GCATTGGTCG CCACCGGAGT GAGCGCAGCA TGGAGCGGCC ATGCATTCGC GGACGTAAAA ATCGGCGTGA CCTTGTCGGC AACGGGCCCG GCCGCGTCGC TCGGCATTCC GGAAAAAAAC ACGATTGCGC TGCTGCCTAA AGAGGTGGCG GGCCAGAAGA TCGACTACAT CGTGCTCGAC GACGCCACGG ATTCCACCCA GGCGGTCAAG AACACGCGCA AGCTCACGAG CGAAGATCAC GTAGATGCGC TGATCGGCTC GACCGTCGTG CCGAATTCGC TGGCCATGAT CGACGTCGCC GCTGAAACCA CCACGCCCAT GATCTCCATG GCAGCGGCGG CGAGCATCGT CGAACCGATG GATGCGAAGC GCGCCTGGGT CTTCAAGACG CCGCAGAATG ACATTCTCAT GGCCACCGCG ATCGCGCAGC ACATGTCGAA CCACGGTGTG AAGACGGTGG CCTTTATCGG TTTCTCCGAC GCATACGGCG AGAGCTGGTT CAAGGAATTC GGCAAAGCCG CGGATCTCGC GAAGATCAAG GTCGTCGCGA ACGAGCGCTT CGCACGCAAC GACGCATCGG TGACCGGTCA GGTGCTGAAG ATCATGTCGC AGAATCCGGA CGCGGTCCTG ATCGCCGGCG CAGGCACACC GGCTGCGCTG CCGCAGAAAA CGCTCAAGGA ACGCGGCTAC AAGGGCAAGT ACTATCAGAC GCACGGCGTC GCCAACAATG ACTTCCTGCG CGTGTGCGGC AAGGATTGCG AAGGCACCTA TCTGCCGGCG GGTCCGTTGC TCGTCGCCGA ACAACTGCCC GATTCGAATC CCGTGAAGAA GAGTGCGCTC GCCTATAAGC GCGCGTACGA AACCGCATAT GGCGCCGGCT CGGTGTCCAC CTTCGGCGGC CACGCATGGG ACGCGGGCCT GCTGCTGCAA CGCGCGATTC CGCAGGCGTT GAAGAAGGGG CAACCGGGCA CGCCTGCCTT CCGCGAAGCA TTGCGGGCCG CGCTGGAAAG CACCAAAGAC ATGCCCGCGT CGCACGGCAT CTTCAACATG AGCGCGAACG ACCATGCTGG TCTGGATCAG CGGGCGCGCG TGATGGTGGA GATTGTCGGC GGCAAGTGGA AGTTGTCCGG CGACTGA
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Protein sequence | MKSALRWISA ALVATGVSAA WSGHAFADVK IGVTLSATGP AASLGIPEKN TIALLPKEVA GQKIDYIVLD DATDSTQAVK NTRKLTSEDH VDALIGSTVV PNSLAMIDVA AETTTPMISM AAAASIVEPM DAKRAWVFKT PQNDILMATA IAQHMSNHGV KTVAFIGFSD AYGESWFKEF GKAADLAKIK VVANERFARN DASVTGQVLK IMSQNPDAVL IAGAGTPAAL PQKTLKERGY KGKYYQTHGV ANNDFLRVCG KDCEGTYLPA GPLLVAEQLP DSNPVKKSAL AYKRAYETAY GAGSVSTFGG HAWDAGLLLQ RAIPQALKKG QPGTPAFREA LRAALESTKD MPASHGIFNM SANDHAGLDQ RARVMVEIVG GKWKLSGD
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