| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3875 |
|---|
| Symbol | |
|---|
| ID | 6283139 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 4330867 |
|---|
| End bp | 4332297 |
|---|
| Gene Length | 1431 bp |
|---|
| Protein Length | 476 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642623461 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001897486 |
|---|
| Protein GI | 187925844 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 55 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGTC CATTTCGCAC TCCGTTACCA GGCGGTTGGC CTGAAGACGC GCCACCGAGG
TCGATACTTT TCAGCCTCGC ACCGTACGGC TGTTCAGGAG AGGACCGCGA GAACTTGGGA
AATTACCTCT CACGATTGAG TAGTGCCCAT GGCATGGCAC GCTGGACGCT AACGAAACGA
ATCATTGGCC CTGCCGCTGA GGACCTCTTT GGAATCAGCA GCGACCGGAT GGCTCGCGAC
GTTGGACGTG CAGATTACAG CTCCAGCATC TCGAGCCATA CAGAGCAGGC GCATCAATGG
GCACATACGC TGAATGCTCT AACACTGCGC AACAATCTGC AACTCTGCAC TTTGCTGCCG
CTGCGGCAAC TCGTCTCAGG GTTCAAGTTG TTGTCGAGTA AAAGACGGTT TTGTCCAATT
TGCTTCAAGG ACGACGCGCG TGAAGGTCGT GACCGCTATG ACCGTTTGCT TTGGAGCATC
GACGCCGTCA ATGCATGTCC CTTGCACCAG GTGCGGCTCG TCGACCTTCC AAAGGTAAAA
AGAAAGCCCG TGTTCAACGG AAGGGCCGAG TTGCCCTCTG CCGCGGTCGA GGCCGACCTC
AAGTCGCTCA AGTCGGCAGC GTCGATACCC GCGTCTGACT ATGAGGTGGC GAGCGCGCAG
CTCATCGCGG AGCTGCTTGA CGATGCGGCG GTTTTTCCGA ACGCCGGGTA CACAGCTTCC
GCTCAGTCCG CCTTCCTTGC ACATGCCGTT GATACCCTCT TCAACGGCAA GTCTGCATAT
CTTGCAGCTC ACCTCCGGGT GGGAAAATCA CAGGTGCACG GATGGGTAAA GGGACAAATC
CGGATGAGCC TACCGCGCCT AGCGCTCGCT GCCTATTGCT GCAGTTGCGC CATTGCGGAC
ATCTTGCTTG GCAACAAGGT GATGCTTTCG CTTCGACCGG CGCCGAAATG TCAGGACCGT
CGGCTGGTTG CTAGTGGTCG CGATGGAGCC AAGCGCTCGA GAGACGACTT GTACAAGGAG
CTTGATGAAT TGCTTCGTGC TGGGCAAACG AAGAATGCGA CCGATGCAGC AAAGCAGATT
AACGTTTCGC TGAAATTCCT TCGAAAGACC TTTCCCACTG AACATGCGCT CTTGGTTCAG
CGTGGCAGCG AGCTCGTGAA AGCTACCCGA AGTGATGCTT CGGGGACTCT TGAGCGAGTG
TATCTGGAGG AGCATAAAGC GCTTTACGCG GCCGGCATCT ATCCTGCGCG AAGGCGCGTC
GCCGAGCGAA TGCGGGGCAA GATTAAAACG TTGGGAAGGC GCCAAGACGT GCAACGAGCC
CAGCGGAAAG CTCATGCCGA GACGGGAGTG ATGATTTCAC GAGGTCGGCA ATCTGGCGGG
CTCAACCTGC CTAGACTCAT CAATATGGGA TTAACGGAGG GAAAAGTCTA A
|
|---|
| Protein sequence | MKSPFRTPLP GGWPEDAPPR SILFSLAPYG CSGEDRENLG NYLSRLSSAH GMARWTLTKR
IIGPAAEDLF GISSDRMARD VGRADYSSSI SSHTEQAHQW AHTLNALTLR NNLQLCTLLP
LRQLVSGFKL LSSKRRFCPI CFKDDAREGR DRYDRLLWSI DAVNACPLHQ VRLVDLPKVK
RKPVFNGRAE LPSAAVEADL KSLKSAASIP ASDYEVASAQ LIAELLDDAA VFPNAGYTAS
AQSAFLAHAV DTLFNGKSAY LAAHLRVGKS QVHGWVKGQI RMSLPRLALA AYCCSCAIAD
ILLGNKVMLS LRPAPKCQDR RLVASGRDGA KRSRDDLYKE LDELLRAGQT KNATDAAKQI
NVSLKFLRKT FPTEHALLVQ RGSELVKATR SDASGTLERV YLEEHKALYA AGIYPARRRV
AERMRGKIKT LGRRQDVQRA QRKAHAETGV MISRGRQSGG LNLPRLINMG LTEGKV
|
|---|
| |