| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3750 |
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| Symbol | dppF |
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| ID | 6282016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 4197633 |
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| End bp | 4198652 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642623337 |
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| Product | dipeptide transporter ATP-binding subunit |
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| Protein accession | YP_001897362 |
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| Protein GI | 187925720 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.765741 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCAG TACTCGAAAC GCGGCGCCAG TCCGACCATG CGGGCGACCA CGTGCTGGTC
GCGGAGCAAT TGGCGCGCTA CTACACGGTC AAGCGCGGCA TGTTCGCGTC CGGCACGGTG
AAGGCGCTCA ACGGAGTCTC GTTCGCGCTC GAACGCGGCA AGACGCTGGC AGTGGTTGGC
GAATCCGGCT GTGGCAAATC GACGCTCGCG CGTCAATTGA CCATGATCGA AGCGCCCTCC
GCGGGCCGTC TGCTGATCGA CGGTGAAGAC GTGGCCGGCG CCGATCACGC GAAGATCGCA
GCGCTGCGCC GGCGCGTGCA GATGGTGTTC CAGAACCCGT TTGCCTCGCT CAATCCGCGC
AAGACCGTCG AGCAGACGCT CGGCGAACCG CTCGCAATCA ACACGCAACT GAGCGCGACC
GAGCGCGCCG AACGGATCGC GCAGATGATG CGCACCGTCG GCCTGCGTCC GGAACATGCG
AAGCGCTATC CGCATATGTT CTCCGGCGGT CAGCGGCAAC GTGTGGCGAT TGCGCGCGCG
ATGATTCTCG ACCCGCAGAT CGTGGTCGCC GACGAACCCG TATCGGCGCT CGACGTGTCG
ATCCAGGCGC AGATTCTGAA TCTGTTCATG GATCTGCAGG AACAGTTCAA GACCAGCTAC
GTGTTCATCT CGCACAACCT CTCGGTGGTG GAGCATATCG CCGACGACGT GATGGTGATG
TACTTCGGCG GCGTGGCGGA GCTCGGCGAC AAGAAGCGGA TTTTCTCGAA CCCGCGTCAT
CCGTACACGC GCGCGCTGAT GTCGGCCACG CCGTCGATCT TCGAGGCGGA TCGCACGATC
AAGATCAAGC TGCAAGGCGA AATGCCTTCG CCGCTGAATC CGCCGTCGGG TTGCACGTTT
CATCAGCGCT GCCCGTACGT GATCGACCGC TGCCGCAGCG AAGAACCGAA GCTGCGTGAA
GTGGATGGCC GCCAGGTGTC GTGTCACCGC GCCGAGGAGG TGGGGGACGT GGATGCCTGA
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| Protein sequence | MNAVLETRRQ SDHAGDHVLV AEQLARYYTV KRGMFASGTV KALNGVSFAL ERGKTLAVVG
ESGCGKSTLA RQLTMIEAPS AGRLLIDGED VAGADHAKIA ALRRRVQMVF QNPFASLNPR
KTVEQTLGEP LAINTQLSAT ERAERIAQMM RTVGLRPEHA KRYPHMFSGG QRQRVAIARA
MILDPQIVVA DEPVSALDVS IQAQILNLFM DLQEQFKTSY VFISHNLSVV EHIADDVMVM
YFGGVAELGD KKRIFSNPRH PYTRALMSAT PSIFEADRTI KIKLQGEMPS PLNPPSGCTF
HQRCPYVIDR CRSEEPKLRE VDGRQVSCHR AEEVGDVDA
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