Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3718 |
Symbol | |
ID | 6283031 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 4165997 |
End bp | 4166596 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642623305 |
Product | LexA repressor |
Protein accession | YP_001897330 |
Protein GI | 187925688 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
TIGRFAM ID | [TIGR00498] SOS regulatory protein LexA |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.875348 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.435562 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGTTC GATGGGTCGA GCAAATGAAC GACGAAACGC ACTTGGCCGC TCTACGTAGT TATTGGAAGC GACATCAGAC CTTTCCAGCG ATGTCGAAAC TCTGCGATGT CGTTGGCCTA ACAAGCACGA GCAGCATCTT CGCCCTTATC AAAAGGCTAT CCGAGGCGGG CTTCCTCGAA CGAGTCGAAG GTCGCATCGC GCCGACGCGC CGTTTTTTCG GTCGCCCCGT GCTCGGCGCC GTCCGAGCCG GTCAGCCCCA GCCTGAGGGG CAGGAACCGC CGGAACTGCT GACTATCGAC GATTACCTCG TTGATGACCC AAACAGAACA GTGCTCTGCC GGGTGCGAGG TGAGTCGATG CGAGATGTCG GTCTTCTGGA CGGAGACTTG GTGGTCGTCG AGAAGAATCG GCCGACTCGT CCTGGCGACA TCGTCGTTGC GGTCGTCGAT GGCGAGATGA CCGTGAAGAC TCTGCGTCTC GACAAGAATG GTGCGTATTA TCTCGAGCCC GCTAATCAGG ACTTTCAGGT GATTCGACCG CAGGGGTCGC TTGAGATAGT TGGTGTTGTA GTCGGCTCTG TTCGCAAGTA CGGCCGTTAA
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Protein sequence | MNVRWVEQMN DETHLAALRS YWKRHQTFPA MSKLCDVVGL TSTSSIFALI KRLSEAGFLE RVEGRIAPTR RFFGRPVLGA VRAGQPQPEG QEPPELLTID DYLVDDPNRT VLCRVRGESM RDVGLLDGDL VVVEKNRPTR PGDIVVAVVD GEMTVKTLRL DKNGAYYLEP ANQDFQVIRP QGSLEIVGVV VGSVRKYGR
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