| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3716 |
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| Symbol | |
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| ID | 6284608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 4162917 |
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| End bp | 4164206 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642623303 |
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| Product | D-amino-acid dehydrogenase |
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| Protein accession | YP_001897328 |
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| Protein GI | 187925686 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.276162 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAATGC ATGTCTGTGT GCTCGGCGGC GGAGTTGTTG GTGTGACTAC TGCCTACTTT
CTGGCTCGCG AAGGCTATCA GGTGACGGTA GTCGAAAAAC ACACGCAGGC AGCTGCTGAA
GCAAGCTTCG CGAACGGCGG CCAGCTCAGC TACAGCTACG TTGCGCCTCT GGCTGGGCCA
TCGGTACTGA GCCATCTTCC AGGTTGGCTG TTGAGCCGCA CCGCGCCGCT TCGTTTTCGC
CCCAGCCTCG ATGTTGACCA ATGGAAATGG TGCTGCGAGT TTCTTCGACA TTGCACGAGT
GCGCGCAGCC GACAAACGAC CGTCGAACTA CTGAGGCTCG GTGCCTACAG CCGGACAGTG
ATGCAGGAGC TGATGACGAA CGAATCGCTC GACTTTGCCT TCAACAAGAG CGGAAAACTC
GTCGTCTACC GCAACGCCGA GGATTTTGCG GGCGCGCGCA AGCAAATGGA TTTCCAGGCC
GGGTTTGGCG TCGAGCAGTC GGCACTCGAT GCCGATGCAT GCATTGCCGT CGAGCCGGCT
CTGGAAAGCA TCCACCAAAA GCTCGTTGGC GGCATCTACA CCGCATCAGA GGAAGCCGGT
GACTGCCATC TTTTCACTCG AGAACTCAGC CGATTGGCGA CCGAAAAGTA TGGCGTGCGC
TTTCTCTTTG GGACGCAATT GCACGGGCTG AGGCAGGAGA GTGGCAAAGT GGTGGCTGCT
CAAACCTCAG AAGGCGACAT CATCGCGGAC GACTACATTG TCGCGCTTGG CAACGGTAGC
CCAAATCTCC TCCATCCACT CGGTATCAAT CTGACCATGT ATCCGCTCAA GGGATACAGC
CTTACCGTAC CAGTGAACCT TGGCAACGTA GCACCGAAGG TCAGTGTGAC TGACCTCCAT
CACAAAATCG TATACGCTCG CCTCGGCGAC CAGCTCCGCA TTGCAGGCAT GGTCGATATG
ACGCCTGCCG GTTCGAAAGA AGACTCTGCG CGAATTCGCC TGTTGCAGTC GCAAGCGCAA
GCTACGATGC CAAACGCCGG CGACTTTTCG GCGACGCAGA TTTGGACGGG GTCTCGCCCG
ACCACACCTG ATAGCAAACC CCTTCTCGGA GCCACTCGTT TCCCCAATCT TTGGCTCAAT
ACCGGCCAAG GCTCCCTTGG TTTCACCCTC GCCGCTGCCA GTGCGAAATT GGTCACAGAC
GCCGTTCGAG GCCGAACGAC TCGAATCGAC ATCTCGCCTT ATCAGCTCGC AGGCAGAAAC
GAAGCACGGA CATACGAGTT CGCCATCTAA
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| Protein sequence | MTMHVCVLGG GVVGVTTAYF LAREGYQVTV VEKHTQAAAE ASFANGGQLS YSYVAPLAGP
SVLSHLPGWL LSRTAPLRFR PSLDVDQWKW CCEFLRHCTS ARSRQTTVEL LRLGAYSRTV
MQELMTNESL DFAFNKSGKL VVYRNAEDFA GARKQMDFQA GFGVEQSALD ADACIAVEPA
LESIHQKLVG GIYTASEEAG DCHLFTRELS RLATEKYGVR FLFGTQLHGL RQESGKVVAA
QTSEGDIIAD DYIVALGNGS PNLLHPLGIN LTMYPLKGYS LTVPVNLGNV APKVSVTDLH
HKIVYARLGD QLRIAGMVDM TPAGSKEDSA RIRLLQSQAQ ATMPNAGDFS ATQIWTGSRP
TTPDSKPLLG ATRFPNLWLN TGQGSLGFTL AAASAKLVTD AVRGRTTRID ISPYQLAGRN
EARTYEFAI
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