| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3713 |
|---|
| Symbol | |
|---|
| ID | 6284605 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 4159052 |
|---|
| End bp | 4159939 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642623300 |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_001897325 |
|---|
| Protein GI | 187925683 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.0343753 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTTGC GTCACATCGA GGTTTTCCAT GCAGTAATGC AGGCGGGCTC TCTCTCGGGA
GCGGCTGACC TCTTGAATAT TTCTCAGCCG GCCGCGAGCA AAATGCTCGC GCAAGCCGAG
CACAGCCTCG GTGTCGCGCT GTTCAAGCGA TTGCCTGGCG GGCTCAAGGC CACACCCGAA
GCCGTCATGT TGTTTCAAGA GACGAAATCT CTTCACTTGA GCCTTGAGCG AGTCCGGAAT
CTGGCCCGCA ACCTCGCCTC ACATCCAGGC GGGATGCTGA GAATTGGGTG CATCCCGAGC
CTTGGTCTCA GTCTCGTTCC ACAGGCAGTC GCTGCGTTCA CTGGCCTTTG TCCCGACGTG
TCGCTAAACA TTCGAACGGA AAACAACGAG ACCCTTTCGG CCCTGTTGCT AGCACAGGAA
ATCGACGTTG GTATCGCGTT TGAACCGACA GCAAAGGCCG GTATTACCAT CGAAGAACTC
GGGCAAGCCA AGGCAGTGTT TGTTGGTCCA AACGATGGGA CAACCGGTAG TGGCCTCAGT
CCTGTCCATC TCGGTGACCT GGACTACTCG AAGTGGATTG GCCTCGACTC CGCGGACCCG
CTCGGATTGA AAATAAGCGC CACGTTGGCG ACTCTCGACA AGCACGATGT ATCGCCCATG
ATTGAGGTGA AGACCTACTA CCTTGCCCGC GCGCTGGCCG AGAGCGGCGT AGGCTTCACG
ATTATCGACG AATACACCGC CACAGGGATG GGAGACCGCA GTTTCGTCAA GGAGCTCGAA
CCTGCTTTCT CAATTGGGGT TAGCGTGATG ACCGCTGCGA GCAATGCTGG AACTCACGCA
CTAAAGGTGT TCATGCAACA ACTCGCTAAG CGCGTGGGGA GGTCGTAA
|
|---|
| Protein sequence | MRLRHIEVFH AVMQAGSLSG AADLLNISQP AASKMLAQAE HSLGVALFKR LPGGLKATPE
AVMLFQETKS LHLSLERVRN LARNLASHPG GMLRIGCIPS LGLSLVPQAV AAFTGLCPDV
SLNIRTENNE TLSALLLAQE IDVGIAFEPT AKAGITIEEL GQAKAVFVGP NDGTTGSGLS
PVHLGDLDYS KWIGLDSADP LGLKISATLA TLDKHDVSPM IEVKTYYLAR ALAESGVGFT
IIDEYTATGM GDRSFVKELE PAFSIGVSVM TAASNAGTHA LKVFMQQLAK RVGRS
|
|---|
| |