Gene Bphyt_3683 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3683 
Symbol 
ID6281886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp4129978 
End bp4130802 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content63% 
IMG OID642623272 
ProductOmpW family protein 
Protein accessionYP_001897297 
Protein GI187925655 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3047] Outer membrane protein W 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000286443 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000000000106929 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAAAAAAA TCTATTTCGC GTTACTGGCC GCCTGCCTGT CCGCCAGCGC GCACGCCCAG 
CATGCAGGCG ACAACGTCGC CGTGCTCGGC TGGTTTCACG TGATGCCGCA GGATTCGAGC
TCGCCGCTCA CCACCAACGT CGCGCCGACG CCGATCAACA CGCCGCTGCG TCTGCCGAGT
TCTTTCACGT CGCCCGGCAC GAGTTTGTCG ACCAATAGCG CCAACACCGT CGGCCTGGTG
TTCAGCCACT ACCTCACCGA TCACATTGCC GTGACGACGG TGGCGGGCGT GCCGCCGGTC
TTCAAGATCT ATGGACACGG CACCATCAAG CCGCCGGGAC CGGCCGGCGC GCTCGGCCAG
CAGGATCTCG GCGATCCGCA GGCCAACCCG ATCGTCAAAA GCGTGCGCCA ATGGAGCCCG
GCGCTGCTGT TCCAGTATTA CTTCAATGCT CCGACGGCGC ATTTTCGGCC GTTTGTCGGC
GTCGGCGTGT CGTATAACTG GTTCTCGGAC GTGCAGCTGG GCCAGAACTT CGTCCAGTCG
ACGCAAAACA ACTTAGGTGC GGTGCTGGCC GCCGGCGCGG GAAAGCCGGG GCAGACGCAG
GTGTCGGCGA AAGCGTCGTC GTCCTGGGCG CCGGTGTTCA ACGCGGGCCT TGCGTACAAC
ATCACCGATC ATTGGGGCCT GGTGGCGTCG GTCACCTACA TTCCGCTGAA GACGACCTCG
TCGGTCATCA TCAAGGCCGC GGACGGCACG GAACTGGGGG TGTCGAAGGC AGAACTGAAG
GCGGACCCGA TCATTTCGTT CCTCGCCGTT TCGTACAAGT TCTGA
 
Protein sequence
MKKIYFALLA ACLSASAHAQ HAGDNVAVLG WFHVMPQDSS SPLTTNVAPT PINTPLRLPS 
SFTSPGTSLS TNSANTVGLV FSHYLTDHIA VTTVAGVPPV FKIYGHGTIK PPGPAGALGQ
QDLGDPQANP IVKSVRQWSP ALLFQYYFNA PTAHFRPFVG VGVSYNWFSD VQLGQNFVQS
TQNNLGAVLA AGAGKPGQTQ VSAKASSSWA PVFNAGLAYN ITDHWGLVAS VTYIPLKTTS
SVIIKAADGT ELGVSKAELK ADPIISFLAV SYKF