Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3683 |
Symbol | |
ID | 6281886 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 4129978 |
End bp | 4130802 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642623272 |
Product | OmpW family protein |
Protein accession | YP_001897297 |
Protein GI | 187925655 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3047] Outer membrane protein W |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000286443 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000000000106929 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGAAAAAAA TCTATTTCGC GTTACTGGCC GCCTGCCTGT CCGCCAGCGC GCACGCCCAG CATGCAGGCG ACAACGTCGC CGTGCTCGGC TGGTTTCACG TGATGCCGCA GGATTCGAGC TCGCCGCTCA CCACCAACGT CGCGCCGACG CCGATCAACA CGCCGCTGCG TCTGCCGAGT TCTTTCACGT CGCCCGGCAC GAGTTTGTCG ACCAATAGCG CCAACACCGT CGGCCTGGTG TTCAGCCACT ACCTCACCGA TCACATTGCC GTGACGACGG TGGCGGGCGT GCCGCCGGTC TTCAAGATCT ATGGACACGG CACCATCAAG CCGCCGGGAC CGGCCGGCGC GCTCGGCCAG CAGGATCTCG GCGATCCGCA GGCCAACCCG ATCGTCAAAA GCGTGCGCCA ATGGAGCCCG GCGCTGCTGT TCCAGTATTA CTTCAATGCT CCGACGGCGC ATTTTCGGCC GTTTGTCGGC GTCGGCGTGT CGTATAACTG GTTCTCGGAC GTGCAGCTGG GCCAGAACTT CGTCCAGTCG ACGCAAAACA ACTTAGGTGC GGTGCTGGCC GCCGGCGCGG GAAAGCCGGG GCAGACGCAG GTGTCGGCGA AAGCGTCGTC GTCCTGGGCG CCGGTGTTCA ACGCGGGCCT TGCGTACAAC ATCACCGATC ATTGGGGCCT GGTGGCGTCG GTCACCTACA TTCCGCTGAA GACGACCTCG TCGGTCATCA TCAAGGCCGC GGACGGCACG GAACTGGGGG TGTCGAAGGC AGAACTGAAG GCGGACCCGA TCATTTCGTT CCTCGCCGTT TCGTACAAGT TCTGA
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Protein sequence | MKKIYFALLA ACLSASAHAQ HAGDNVAVLG WFHVMPQDSS SPLTTNVAPT PINTPLRLPS SFTSPGTSLS TNSANTVGLV FSHYLTDHIA VTTVAGVPPV FKIYGHGTIK PPGPAGALGQ QDLGDPQANP IVKSVRQWSP ALLFQYYFNA PTAHFRPFVG VGVSYNWFSD VQLGQNFVQS TQNNLGAVLA AGAGKPGQTQ VSAKASSSWA PVFNAGLAYN ITDHWGLVAS VTYIPLKTTS SVIIKAADGT ELGVSKAELK ADPIISFLAV SYKF
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