| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3550 |
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| Symbol | |
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| ID | 6283807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 3993728 |
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| End bp | 3994093 |
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| Gene Length | 366 bp |
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| Protein Length | 121 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642623130 |
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| Product | histidine triad (HIT) protein |
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| Protein accession | YP_001897164 |
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| Protein GI | 187925522 |
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| COG category | [F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0614045 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.000408347 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAGCCACG ACCCGAACTG CCTTTTCTGC AAGATCGCTG CCGGCGAAAT CCCGTCGACC
AAAGTCCACG AAGACGACGA GTTCGTCGCC TTCCGCGACA TTCGTCCGGC TGCGGAGACG
CATGTGCTGG TGATTCCGCG CAAGCACATC GCCACGCTGT CGAACTGCAC CGAAAGCGAT
GCACCGCTGC TTGGTAGAAT GCTGGTCTTG GTGGCGCGTT TAGCCGATCA GCTGGGCGTG
GCGTACACCG GCGGCGAAAC GGGTTTTCGC ACGGTAATCA ATACCGGTCC GGGCGGCGGC
CAGGAGGTGT ATCACCTGCA CGCGCACATT CTCGCGGGAC CGCGCCCCTG GCAGCGCATG
GGGTGA
|
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| Protein sequence | MSHDPNCLFC KIAAGEIPST KVHEDDEFVA FRDIRPAAET HVLVIPRKHI ATLSNCTESD
APLLGRMLVL VARLADQLGV AYTGGETGFR TVINTGPGGG QEVYHLHAHI LAGPRPWQRM
G
|
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