| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3548 |
|---|
| Symbol | tatB |
|---|
| ID | 6283805 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 3992693 |
|---|
| End bp | 3993211 |
|---|
| Gene Length | 519 bp |
|---|
| Protein Length | 172 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642623128 |
|---|
| Product | sec-independent translocase |
|---|
| Protein accession | YP_001897162 |
|---|
| Protein GI | 187925520 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1826] Sec-independent protein secretion pathway components |
|---|
| TIGRFAM ID | [TIGR01410] twin arginine-targeting protein translocase TatB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0868381 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.000446597 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGACC TCGGTCTAAC CAAGATGGCG CTGATCGGCG TCGTCGCGCT GGTCGTACTC
GGGCCTGAGC GCCTGCCACG CGTCGCCCGC ACGGCCGGCG CGTTGTTCGG CCGCGCACAG
CGGTATATCA ACGACGTGAA GGCCGAAGTC ACGCGCGAAA TCGAACTCGA CGAATTGCGT
CGGATGAAAA GCGAGTTCGA GGCCGCCGCG ACCAATGTCC AAACCTCCGT TCAGGACAAC
CTGCGCAAGC ACGAGTCCGA ACTGAACGAC GCGTGGAACA GCGGCTCGTC GGTGTCGCCG
AGCATTGCCG GTGGCGCGCT CGAAGATGTG GGCAACACCT CGTGGTCGGG CAGCACGCCC
GCCGCGGCCG CCAAACGCAA GAACTGGCGC GTCAAGCAGA CGGCCATGCC CACGTGGTAC
AAGCGCGCGA CCACGCGCCG CACGCGTGTG CAGTCGGGCG CTGCGCGCGT GGCGCGGCAT
ACGCCGACCA GCATGCGTCG TCCGACGCGG TTCTTCTGA
|
|---|
| Protein sequence | MLDLGLTKMA LIGVVALVVL GPERLPRVAR TAGALFGRAQ RYINDVKAEV TREIELDELR
RMKSEFEAAA TNVQTSVQDN LRKHESELND AWNSGSSVSP SIAGGALEDV GNTSWSGSTP
AAAAKRKNWR VKQTAMPTWY KRATTRRTRV QSGAARVARH TPTSMRRPTR FF
|
|---|
| |