| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3533 |
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| Symbol | |
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| ID | 6282525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 3978925 |
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| End bp | 3979560 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642623112 |
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| Product | transcriptional regulator, TetR family |
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| Protein accession | YP_001897147 |
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| Protein GI | 187925505 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.1353 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.182077 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGACA GTCAAACCTC AAAGCCGGCC TCTGCGCGCC GCACGCGCAA CGCGCAGACC
GCCGGCCCGC AGGCGCAACA GCACTTGCTG CGCGCCGCGG ACGAGCTGTT CTATCGCGAG
GGCGTGCGAG CCGTCGGCGT GGACGCGGTG GTCGAGCGCG CCGGCGTGAA CAAGATGAGT
TTGTACCGGC AGTTTTCGTC GAAAGACGAG CTTGTCATGG CTTACCTGGA GCGTAAGGAC
GAGCAGTTCT TCAGCTATGT GGAGCGCAGC TTCGCCAAAC ATCCGGGCGA GCCGGCCCGG
CAGCTTCGGC AATATTTCGA CGACCTCGCG GTGCGCGCGT CTGTCGACGA TTATCGCGGC
TGCCCTTTCG TGAATGTGTC GGTGGAGTTT CCGGAGACGG CGCATCCGGC GCGGCAGTTC
GTGTTTCGCA ACAAGGCGCG CCTGATGGCG CGGCTCACGG AACTGACCAC GGCAGCGGGC
GCCGATGATC CGGTAGCGCT CGCCAATGCG CTGGGTCTGA TGATCGAAGG CGTGTATGCG
GCCAGCCAGA CGTATGGGCC CGGATGCGGG CCCATTCTAG CCGCGCCCAA AGTCGCCGCA
CAGTTGATCG CCGCGGCGTG CGGCGCGGCA GCATAG
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| Protein sequence | MSDSQTSKPA SARRTRNAQT AGPQAQQHLL RAADELFYRE GVRAVGVDAV VERAGVNKMS
LYRQFSSKDE LVMAYLERKD EQFFSYVERS FAKHPGEPAR QLRQYFDDLA VRASVDDYRG
CPFVNVSVEF PETAHPARQF VFRNKARLMA RLTELTTAAG ADDPVALANA LGLMIEGVYA
ASQTYGPGCG PILAAPKVAA QLIAAACGAA A
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