Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3396 |
Symbol | |
ID | 6283708 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 3826034 |
End bp | 3826450 |
Gene Length | 417 bp |
Protein Length | 138 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642622970 |
Product | guanine-specific ribonuclease N1 and T1 |
Protein accession | YP_001897011 |
Protein GI | 187925369 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG4290] Guanyl-specific ribonuclease Sa |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000799345 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0033697 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCACGCA AGTGGCAACG CATGAAAGGC GTGCTGATCG GTGCTATTAC GCTGTGCGTT TTATCCGGCC CCGTGCCAGG CGCGTTCGCG CGCGACTCCA CGGCACCCGT CGACGCGAAC GCGCAGTTGC AGGGCACCAT CGCGCTGGCG CAGTTGCCGC GCGAAGCGGT CAATACATTG AACTTGATTG CCGCAGGCGG GCCTTACCCG TATGAGAAGG ACGGCATCGT ATTCGGCAAT CGCGAACGGT TGCTGCCGGC CCATCGGCGC GGCTATTACC ACGAATACAC CGTTCCCACG CCTCGCTCAC GTAATCGCGG GGCGCGTCGC ATCGTCTGCG GAGGTCCGCT GAAGCGAACC GACAATTGTT ACTACTCGGA CGACCACTAC ACCAGTTTTA ATCGTATTGT TGAATGA
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Protein sequence | MARKWQRMKG VLIGAITLCV LSGPVPGAFA RDSTAPVDAN AQLQGTIALA QLPREAVNTL NLIAAGGPYP YEKDGIVFGN RERLLPAHRR GYYHEYTVPT PRSRNRGARR IVCGGPLKRT DNCYYSDDHY TSFNRIVE
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