Gene Bphyt_3396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3396 
Symbol 
ID6283708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3826034 
End bp3826450 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content60% 
IMG OID642622970 
Productguanine-specific ribonuclease N1 and T1 
Protein accessionYP_001897011 
Protein GI187925369 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG4290] Guanyl-specific ribonuclease Sa 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000799345 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0033697 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCACGCA AGTGGCAACG CATGAAAGGC GTGCTGATCG GTGCTATTAC GCTGTGCGTT 
TTATCCGGCC CCGTGCCAGG CGCGTTCGCG CGCGACTCCA CGGCACCCGT CGACGCGAAC
GCGCAGTTGC AGGGCACCAT CGCGCTGGCG CAGTTGCCGC GCGAAGCGGT CAATACATTG
AACTTGATTG CCGCAGGCGG GCCTTACCCG TATGAGAAGG ACGGCATCGT ATTCGGCAAT
CGCGAACGGT TGCTGCCGGC CCATCGGCGC GGCTATTACC ACGAATACAC CGTTCCCACG
CCTCGCTCAC GTAATCGCGG GGCGCGTCGC ATCGTCTGCG GAGGTCCGCT GAAGCGAACC
GACAATTGTT ACTACTCGGA CGACCACTAC ACCAGTTTTA ATCGTATTGT TGAATGA
 
Protein sequence
MARKWQRMKG VLIGAITLCV LSGPVPGAFA RDSTAPVDAN AQLQGTIALA QLPREAVNTL 
NLIAAGGPYP YEKDGIVFGN RERLLPAHRR GYYHEYTVPT PRSRNRGARR IVCGGPLKRT
DNCYYSDDHY TSFNRIVE