Gene Bphyt_3347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3347 
Symbol 
ID6283661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3766469 
End bp3767410 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content66% 
IMG OID642622921 
Producthypothetical protein 
Protein accessionYP_001896962 
Protein GI187925320 
COG category[S] Function unknown 
COG ID[COG3662] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.416486 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.000649689 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCGACC AAACCAGGCA GCCCAACTCG TCCAACGGTC TCGCGCAACT TCTCACCGGC 
AGGCTCCGCT CGAAATTGGC CGCCGGCGTC ACCAATCTGA CAAGCGGCAG CGGTCCCACG
CTCGACTACT CGTCGCCTCC GGGCGACCCC GGCTTGTTCG GCCCTGACTC CGTATGCTGG
ACAGTCCACG CCGATTTCAC GTCCATGATG ACGGGCGGCA TCAGCGCGCT TCTGCTTCAG
GCGCTGCACC CGCTGGCCCT CGCCGGCGTG TGGGACCATT CGACGTTTCG CACCGATATT
CTCGGCCGCC TGCGCCGCAC CGCGACATTT ATCGCGGGCA CGACCTTCGG CAGCCGGCAC
GACGCACTGG CGCTGATCGA ACGTGTGAAG CGCATTCATC TTGGCGTGAG CGGCGTCACG
CCTGACGGCC AGCCCTATCG CGCGAGCGAA CCCGAGTTGT TGACGTGGGT GCATGTCGCC
GAAGTGTCGA GCTTCATGAC CGCGCACCTG CGCTATGTGA ACCCGGCACT GCCAATTGCC
GCGCAGGATC AGTACTTCGC CGAGACCGCG CGCATTGCCG AGATGCTCGG CGCGTCGCAC
ATTCCGCGTT CGCGAGCCGA GATCGATGAT TACTTGCTCG CGATGCAGCC CGAGCTTGTG
GCCAGCGAGC GCACGCGTGA AGTCGTGAGG GTTCTTCTGA ACGCGCCCGC CCCCAGCCTA
TCGATGCGGC CGGCCGGCGT GTTGATGTTC AACGCCGGCG TCGATCTTCT GCCTGATTGG
GCACAGGCGA TGTTGGGATT CCAGCGCTAT GCCGTGCTTC GCCGCGCGGT GGCCAGGCCC
GGCGTGCGGC TGGTCGCGCC GGTCATTCGC TGGGCGCTGG TGAATGGTGT GTCGAAACGG
GCGCGCCGAC GCGTGGCAGC GGGCGTAAGC GAACCGGAAT AA
 
Protein sequence
MSDQTRQPNS SNGLAQLLTG RLRSKLAAGV TNLTSGSGPT LDYSSPPGDP GLFGPDSVCW 
TVHADFTSMM TGGISALLLQ ALHPLALAGV WDHSTFRTDI LGRLRRTATF IAGTTFGSRH
DALALIERVK RIHLGVSGVT PDGQPYRASE PELLTWVHVA EVSSFMTAHL RYVNPALPIA
AQDQYFAETA RIAEMLGASH IPRSRAEIDD YLLAMQPELV ASERTREVVR VLLNAPAPSL
SMRPAGVLMF NAGVDLLPDW AQAMLGFQRY AVLRRAVARP GVRLVAPVIR WALVNGVSKR
ARRRVAAGVS EPE