| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3211 |
|---|
| Symbol | |
|---|
| ID | 6283450 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 3619157 |
|---|
| End bp | 3620719 |
|---|
| Gene Length | 1563 bp |
|---|
| Protein Length | 520 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642622785 |
|---|
| Product | AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_001896827 |
|---|
| Protein GI | 187925185 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAGCTTCG ATTCGCCCAC CCGTTCCACG ATCGACATCC CCGCATTGCT GGCGGCCCTG
CCCGAACGCA TCGCCGACAT TCCGGCGCTG GCCGCCGCGC GCGATCCGCA GCACATCGCC
GTGATCGAGG ATGCGCGCCG CCTCACCAGC GCGCAACTGC TGGAGGCCGT CGACGCCGCC
ACTGCGCTGC TGCGCGAATG GGGCGTACGC GGCGGCGATC GCGTGATGAT CGTCGCGGAA
AACAGCATCG TGCAGATCGT GCTGCTGTTC GCGACCGCCC GGCTCGACGC ATGGGCGTTG
GTCTCGAACG CGCGCCTGTC GGCCGCTGAA CTCGACTCGA TCCGTGCGCA CGCGCAGCCT
CGCATAGTCG CCTACGCCAC GGAAAGCTCG GCCGACGCCA AGCTGCATGC AGAGCGCCAT
CACGCCGCCA AGGCGCCCGC CTTCACGCCG GACATCGGCG CCTGGTCGTA CACGGTGGAC
AGCGCGGCCG TCGCCGAGCC GGTCGAAGCC GCAAGCGAGC GCCAGTGCGC CGCGTTGATT
TACACCACAG GCACCACCGG CGCGCCCAAG GGCGTGATGC TGTCGCACCG CAATCTGCTG
TTCATCGCCG CGATCTCGAG CCGCTTGCGC AAAGTCGGCC CCGACGATGT CGTCTATGCC
GTGCTGCCGA TCTCGCACGT CTACGGTTTC GCGTCCGTCT GTCTGGGCAG CCTGCATGCG
GGCGCGACCT TGCGGCTAGT GCCGCGCTTC GCGCCGGAAG CCGTGCGCCG CGCCCTCGCC
GATGAGCGCG TGTCGATTTT CCAGGGCGTG CCGGCCATGC ACGCCAAACT GCTCGAACAT
CTGCAGACAC ACGGTCACGC ATGGTCCGCG CCGCACTTGC GTTTCGCCTA TTCGGGCGGC
TCGCCGCTCG ACGCCGCCTT GAAAGCGCAG GTGGAAAGCG TCTGCGGTCT GCCGCTGCAC
AACGGCTACG GCATGACCGA GAGCAGCCCA ACCGTGTCGC ACACCATGCT CGATGCGCCG
CGCAGCGATT GCTCCGTCGG CGAGGTCATT CCGGGCGTCG AGGTGCGTTT CGTCGGACTC
GACGGCATCG ATGCCGCGCA GGGCGACATC GGCGAGCTAT GGGTGCGCGG CCCCAACGTG
ATGCTGGGCT ACTACCGCAG CCTGGAGCAG ACCCGTGCGG CCGTCACCGA AGACGGTTGG
CTCAAAACCG GGGATCTCGC AAGGCAGGAC GCGGACGGCG CGTTGCATAT CGTCGGGCGA
AGCAAGGAAT TGATCATTCG CTCGGGCTTC AACGTGTACC CGGCCGAAGT CGAACATGTG
CTGAACGCGC ATCCGCAAGT CGTGCAATCG GCGGTGATCG GACGCGCGGT GGAAGGCAAC
GAGGAAGTGG TCGCGTTCGT CGAGTTGCTT ACGGGCGCGA CGGTGACGCC CGCCGAATTG
ATCGATTGTT GCGGCGAGCG TCTCGCGCCA TACAAACGGC CGGCCGAAGT CAAAGTGCTC
GCCGCATTGC CGGCGGCATC GACGGGCAAG ATTCTCAAGC ACCGGCTGCG CGAGTTTCTT
TGA
|
|---|
| Protein sequence | MSFDSPTRST IDIPALLAAL PERIADIPAL AAARDPQHIA VIEDARRLTS AQLLEAVDAA
TALLREWGVR GGDRVMIVAE NSIVQIVLLF ATARLDAWAL VSNARLSAAE LDSIRAHAQP
RIVAYATESS ADAKLHAERH HAAKAPAFTP DIGAWSYTVD SAAVAEPVEA ASERQCAALI
YTTGTTGAPK GVMLSHRNLL FIAAISSRLR KVGPDDVVYA VLPISHVYGF ASVCLGSLHA
GATLRLVPRF APEAVRRALA DERVSIFQGV PAMHAKLLEH LQTHGHAWSA PHLRFAYSGG
SPLDAALKAQ VESVCGLPLH NGYGMTESSP TVSHTMLDAP RSDCSVGEVI PGVEVRFVGL
DGIDAAQGDI GELWVRGPNV MLGYYRSLEQ TRAAVTEDGW LKTGDLARQD ADGALHIVGR
SKELIIRSGF NVYPAEVEHV LNAHPQVVQS AVIGRAVEGN EEVVAFVELL TGATVTPAEL
IDCCGERLAP YKRPAEVKVL AALPAASTGK ILKHRLREFL
|
|---|
| |