| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3175 |
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| Symbol | |
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| ID | 6281502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 3577494 |
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| End bp | 3579158 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642622749 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_001896791 |
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| Protein GI | 187925149 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.000918408 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAGACTC CCGCGGACCG ATTTCTCGCA CTCGACGCAG CCCGCCTCAC CGCCGACGCC
TACGGCAACC ACGCCATCGA CGAATTCCGC GCCGGCCGCA TCACGCGCCG CGATCTGCTG
CGCTATGCCA GCGTGATCGG TTTGTCGCTG GTGGGCGGCG GCGTGCTGAA TGCACCGCGA
GCACGGGCAC AAGGCACCGC AGGCGCGTCG AATCAGACGA TCCGCGTGGC TCACCTGACG
CCGGCGGGCG CGGTCGATCC GCTCACGGTG ACCGACGCCG CCAGTCTTGC GCTGCTGAAC
CAGACCGGCG AATTCCTGAT CGACGACGAC GGCGAAAAGC TCGTGCTGAA GCCGGCGCTC
GCCTTGTCGT GGAAACCGAA CGACAAGGGC GATGTGTGGA CCTTCAAGCT GCGTCCGAAC
GTCAAGTTCC ACGACGGTCA GCCGTTCACC GCCAAAGACG TGGCCGCCAC CTTCGACCGC
CTCGCGGATC CGGCCAGCGG CTCCGCCGCG CTGTCCGTGC TCAAGGGCGT GCTGTCGAAA
GGCGGCGCGA AAGTGGTCGA CGACCACACG GTCGCGTTTC ATCTGGATGC GCCGAACGGC
AATTTCCCCT ACTACGTTTC CTCGGACAAT TACAACGCCG TGATCCTGCC CGCGAACTAT
GCGGGCGGTT ATGAGAAGAG CTTCATCGGC ACAGGCCCGT TCAAGCTCGA AAAGTATCAG
GCGAAGGTGG GCGCGTCGTT CGTGCGCAAT CCCGATTACT GGGGCGACAA AGCGTTACCG
CAACGCGTAC AGTTCTCCTT CTACGCCGAC GAGCAGGCGC AATTGCTCGC GCTGCAAGGC
CATCAGGCCG ACGTGATGGG CACCTTCACC GTGCAGGGCG GCGCCGGCAT TCTGAACAAT
CCGGATTACA AAGCCGTGGG CGTGAAGTCG AGCGCGCATC GGCAGATTCA CATGCGCAAC
GACAGTCCGC TGTTCAAGGA CAAGCGCGTG CGCCAGGCGC TGGCGTTGTC GCTGGATCGC
GACGTGCTGG TGCGCGGCCT CTTCAAAGGA CGCGCGCAAC TCGGCAACGA CAGTCCGTTC
GCGCCGGTGT TTCCGTCGTC GGATGCGGGC GTGCCGCAGC GCAAGATCGA CGTCGCGAAA
GCGAAGCAGT TGCTCGCGCA AGCGGGCGTG CCGAACGGAT TCGACGTGAC GCTGACCACC
GAAAAATACA TGGAGATTCC CGATCTCGCG GTAGTCGTGC AAAACGCGGC GAAGGCAATC
GGCGTGCGCA TCAATCTGAA GGTCGAGAGC CAGTCGCTGT ATTACGGCGC GGGCACGCCG
GGCAAATCGG ATTGGCTCGA CTCGCCGCTC GGCATTACCG ACTACGGTCA TCGCGGCGTG
CCGAACGTGT TCCTGAATGC GCCGCTCACC AGCACCGGCA CGTGGAACGC CGCGCACTTC
AAGAATCCGC AATACGATCA ACTGGTCGAG CAGTTCGTCG CCGCCATCGA TCTCGGCTCG
CAGAAGAAAA TCTCCGGGCA GATCCAGACG CTCTTGCTCG ACGAAACGCC CATCATCATT
CCCTTCTTCT ACGATCAACT GATCGCCATG CGCAAGGGTG TGAACGGCGT GCGCTTCACC
GCACTCGCGC AACTCTATTT CGACCGCGCG GTGTTGAGCG CGTGA
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| Protein sequence | MKTPADRFLA LDAARLTADA YGNHAIDEFR AGRITRRDLL RYASVIGLSL VGGGVLNAPR
ARAQGTAGAS NQTIRVAHLT PAGAVDPLTV TDAASLALLN QTGEFLIDDD GEKLVLKPAL
ALSWKPNDKG DVWTFKLRPN VKFHDGQPFT AKDVAATFDR LADPASGSAA LSVLKGVLSK
GGAKVVDDHT VAFHLDAPNG NFPYYVSSDN YNAVILPANY AGGYEKSFIG TGPFKLEKYQ
AKVGASFVRN PDYWGDKALP QRVQFSFYAD EQAQLLALQG HQADVMGTFT VQGGAGILNN
PDYKAVGVKS SAHRQIHMRN DSPLFKDKRV RQALALSLDR DVLVRGLFKG RAQLGNDSPF
APVFPSSDAG VPQRKIDVAK AKQLLAQAGV PNGFDVTLTT EKYMEIPDLA VVVQNAAKAI
GVRINLKVES QSLYYGAGTP GKSDWLDSPL GITDYGHRGV PNVFLNAPLT STGTWNAAHF
KNPQYDQLVE QFVAAIDLGS QKKISGQIQT LLLDETPIII PFFYDQLIAM RKGVNGVRFT
ALAQLYFDRA VLSA
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