| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3125 |
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| Symbol | |
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| ID | 6281162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 3518512 |
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| End bp | 3520236 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642622699 |
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| Product | pyruvate dehydrogenase |
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| Protein accession | YP_001896741 |
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| Protein GI | 187925099 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.765369 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTAAGC AGACTATCGC GGATTATCTG GCCAAAACAC TGGCTGCGGC AGACATCGAG
CGAATCTGGG GCGTGACGGG CGACAGCCTG AACGGCCTGT CGGATAGCTT GCAACGCCTC
GGTTCGATTC GCTGGATGCA CACGCGCCAC GAAGAAGTGG CCGCCTTCGC CGCCGGCGCC
GATGCCGCCG CGACCGGCAA GCTCGCCGTC TGCGCGGGCA GTTGCGGTCC CGGCAATCTG
CACCTGATCA ACGGCCTGTA CGACTGCCAT CGCAATCATC AACCTGTGCT CGCGATTGCC
GCGCATATTC CGTCTTCGGA AATCGGCCTC GGCTACTTTC AGGAAACTCA TCCGCAAGAG
CTGTTCAAGG AGTGCAGTCA CTACGTCGAA CTGGTGACGA ACCCGTCGCA GTTTCCGCGC
GTGCTGGCGC GCGCCATGCG CACCGCGATC GAAGAGCGCG GCGTCGCCGT GATCGTGCTG
CCGGGCGACG TCGCGTTGGG CGATGCGCCC GACGAGACGC CGAGCTGGGC CGGCACGCTG
GAACGCTCGA TGGTGGTGCC GTCCGAGGCG GATCTCGACC GCCTCGCTGA TCTGCTCAAC
CAGGCGGGCG CCGTGACGCT GTTGTGCGGC AGCGGCTGCG CCGGCGCGCA CGACGAAGTC
GTCGCCTTCG CCGATCAGCT CGGCGCGCCG ACCGTGCATG CGCTACGCGG CAAGCAATAC
GTGGAATGGG ACAACCCGTT CGATGTCGGC ATGACCGGGC TGATCGGCTT CAGCTCCGGC
TATCACGCGA TGATGTCGTG CGACACGCTC GTGATGCTCG GCACCGATTT CCCGTATCGC
AACTTCTATC CGTCGCACGG CAACGTGGTG CAGATCGACC GGCGCGGTTC CGCGCTCGGC
AAGCGCGCGC CGTTAAAGCT CGGTCTGGTC GGCGATGTGA AGGCGACCTT GCAGGCGCTG
ATGCCGCGGC TCAAGCACAA GAGCGACCGG CATTTCCTGG AGAATGCGCG CAAGCACTAT
GCGGATACGC GCAAGGACCT CGACGATCTC GCACGGCCGT CCGCGCCGGG GCGCGCGATA
CATCCGCAAT ACCTCACCAG CATCATCGAC AAGGTCGCCA ACGAGGACGC GGTGTTCTCC
GTCGACGTCG GCACGCCGAC GCTCTGGGCC GCCCGTTATC TGACCATGAA CGGCAAGCGC
ACGCTGCACG GTTCGTTCAA TCACGGCTCG ATGGCCAACG CAATGCCGCA GGCCTTGGGC
GCGCAGGCGG CCGAGCCGGG CCGCCAGGTG ATTTCGCTAT CCGGCGACGG CGGGCTGTCG
ATGCTGCTCG GCGATCTGCT CACCGCGCGT CAGCTCAATC TGCCGATCAA GGTCGTGGTG
TTCAACAACA GCGTGCTCGG CTTCGTCGCG ATGGAGATGA AGGCGGGCGG TTATCTGGAG
GCCGGCACCG ATCTGGCGAC GACCGACTTC GCAGCGATCG CGCGAGGCGC GGGAATATAC
GGTGTCCGAA TCGAACTGTC GGAGAACATC GAACCGGCAT TGCGCGAGGC GTTCGCGCAT
CCGGGTCCGG CCGTGATCGA CGTGGTGACC GCGAAGCACG AACTCGCGAT GCCGCCGAAG
ATCCAGTGGG CACAGGCCAA AGGCTTCAGC CTGTATATGC TGAAGGCGGT GCTGAACGGT
CGCGGAGATG AGGTCGTCGA ACTGGCGACG ACCAATCTGC GCTGA
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| Protein sequence | MGKQTIADYL AKTLAAADIE RIWGVTGDSL NGLSDSLQRL GSIRWMHTRH EEVAAFAAGA
DAAATGKLAV CAGSCGPGNL HLINGLYDCH RNHQPVLAIA AHIPSSEIGL GYFQETHPQE
LFKECSHYVE LVTNPSQFPR VLARAMRTAI EERGVAVIVL PGDVALGDAP DETPSWAGTL
ERSMVVPSEA DLDRLADLLN QAGAVTLLCG SGCAGAHDEV VAFADQLGAP TVHALRGKQY
VEWDNPFDVG MTGLIGFSSG YHAMMSCDTL VMLGTDFPYR NFYPSHGNVV QIDRRGSALG
KRAPLKLGLV GDVKATLQAL MPRLKHKSDR HFLENARKHY ADTRKDLDDL ARPSAPGRAI
HPQYLTSIID KVANEDAVFS VDVGTPTLWA ARYLTMNGKR TLHGSFNHGS MANAMPQALG
AQAAEPGRQV ISLSGDGGLS MLLGDLLTAR QLNLPIKVVV FNNSVLGFVA MEMKAGGYLE
AGTDLATTDF AAIARGAGIY GVRIELSENI EPALREAFAH PGPAVIDVVT AKHELAMPPK
IQWAQAKGFS LYMLKAVLNG RGDEVVELAT TNLR
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