| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3105 |
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| Symbol | |
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| ID | 6284574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 3497312 |
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| End bp | 3498493 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642622677 |
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| Product | Lytic transglycosylase catalytic |
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| Protein accession | YP_001896721 |
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| Protein GI | 187925079 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.375115 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCCT GGTTATCGTG GCGTCCCGAT GAGCGTATCG CGCAAGTTGT GCGTGGTGCG
CTGCGTCGCG GGACGCGAAT GAGTCATCAC CTGTTCAGCA TCGTCGGCGG TATCGCGGTG
GTGCTGACAG TCGCACTGTG GCTGATGCCG GCCCTGCGCG GCACGCTAGC CGCCAAGTTG
ATGCCGGTCA TCTCCGCCGC TGTGCAAGCC GGTCCCGCCC GTCTGCTTCA GGGCAACCCG
CTGCCGGCTT TCGGACCGCC CGCGCGCGCG TCCTCGGACG ACTCGCTGAC CGCCAACACG
AACGGCCCCG ATGCCGTGAG CGGCACGAAC AACGGCAACA CTGTCACCGC GGGCAACTCC
GGCTTTGACA ACGCATTCGA CACAGCCGGC TCGACCGGCA TGGGCGTCGC AGCGCTGAAC
GGCCTCGACC CGCGCACCAT GCAAAGCGTT ACCGCGCTGG CGAGCCTGAT CCCGTCGCAA
CGCGTATCCG CCGACGCACG CGACGACCGC GTCCTGATCT CGACCCGCGA GCAGGACCTG
GTTGCGTCAT TTCTGGCACG GCGCTATCGC GTCGCTCAGG AGCCCGTTAG CGAGCTCGTG
AAGGCGGCGT TCGACACCGG CCGCGAAGTC GGTCTCGATC CGTTGCTGTT GCTTTCAGTA
ATGGCAATCG AGTCGGGCTT CAACCCGTAC GCCGAGAGCG GCGTCGGCGC ACAAGGCCTG
ATGCAGGTGA TGTCCAAGGT GCACTCGGAC AAGTTCCAGT ATTTCGGCGG TCAGAGCGCG
GCGCTCGAAC CGGTCGCGAA CATCAAGGTG GGCGCGCTGG TGCTGAAGGA TTGCATCGCA
CGTGGCGGCT CGCTGCCGGG CGGTTTGCGT CTGTACGTCG GCTCGACCTC GCCGGACGAC
GGCGGCTACG GCGCCAAGGT CATGGCCGAG CGTGCCCGTC TGCGTGACGT GGCGCGTGGC
CGCAAGGTGC CGATCAACGC ACCGCAGGCG CCGGTTTTGA CGGCGTCGAC CAACACGGCT
GCGCCCGCCA GCAGCAATGG CAAGCGCGTG CAGGTGACGC TCGAGGGCAG TCATCAGTTG
AGCGCGGCGA CACCGGTCAA GGCGCCGGTT TCCGCCGAGC AGGACGATGC GAGCGCCAAC
GCGACGAAGC ATGTGGCGTC GGCGTCTGAG CTAGGCGCTT GA
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| Protein sequence | MNAWLSWRPD ERIAQVVRGA LRRGTRMSHH LFSIVGGIAV VLTVALWLMP ALRGTLAAKL
MPVISAAVQA GPARLLQGNP LPAFGPPARA SSDDSLTANT NGPDAVSGTN NGNTVTAGNS
GFDNAFDTAG STGMGVAALN GLDPRTMQSV TALASLIPSQ RVSADARDDR VLISTREQDL
VASFLARRYR VAQEPVSELV KAAFDTGREV GLDPLLLLSV MAIESGFNPY AESGVGAQGL
MQVMSKVHSD KFQYFGGQSA ALEPVANIKV GALVLKDCIA RGGSLPGGLR LYVGSTSPDD
GGYGAKVMAE RARLRDVARG RKVPINAPQA PVLTASTNTA APASSNGKRV QVTLEGSHQL
SAATPVKAPV SAEQDDASAN ATKHVASASE LGA
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