| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3094 |
|---|
| Symbol | |
|---|
| ID | 6284755 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 3487362 |
|---|
| End bp | 3487766 |
|---|
| Gene Length | 405 bp |
|---|
| Protein Length | 134 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642622666 |
|---|
| Product | Endoribonuclease L-PSP |
|---|
| Protein accession | YP_001896710 |
|---|
| Protein GI | 187925068 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
|---|
| TIGRFAM ID | [TIGR00004] endoribonuclease L-PSP, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.152732 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGGTA GCCAGCACGA CCTGCATCTG CCGCATATGG ACAATCCCGC TACGCTTTCG
CAGCCGGGCG GTCACTACAC TCATGTCGCG GTCGCAAATG GTTTCGTGTT CGTCTCGGGA
CAATTGCCGA TCACGGCGCA AGGCGACAAG CTATCCGAGG CCTCGTTCGA GGTTCAGGCA
GAACAGGTGT TAGCCAATGT GCAAGCCGCT TTGGAACGCG CCGGTAGCGG CGTTGCGCAA
CTGGTTCAGG TACGCGTCTA CATTGTCGAT GTCGAGCATT GGATGAGCTT CAATCAGATC
TACGCGCGTT GGGCCGGTGA AGCACGGCCC GCACGCGCAG TAGTGCCGGT CCCGCAGCTG
CACTACGGTT TCAAGATCGA GGTCGAGGCG ACCGCGCTGG TTTAG
|
|---|
| Protein sequence | MAGSQHDLHL PHMDNPATLS QPGGHYTHVA VANGFVFVSG QLPITAQGDK LSEASFEVQA
EQVLANVQAA LERAGSGVAQ LVQVRVYIVD VEHWMSFNQI YARWAGEARP ARAVVPVPQL
HYGFKIEVEA TALV
|
|---|
| |