| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3047 |
|---|
| Symbol | |
|---|
| ID | 6281991 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 3439976 |
|---|
| End bp | 3440710 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642622615 |
|---|
| Product | Methyltransferase type 11 |
|---|
| Protein accession | YP_001896663 |
|---|
| Protein GI | 187925021 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0374295 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.16298 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCGCCAT CCGAAACATC CAGTGTGCCT TTCGTGCCGG AAACGGCGTT CGGGATCTGG
TTCCTGCGTA CCTATACTTG GGAACATCAT GTGCTGCGGG TCGCGATCAA CGACCTCAAA
CGCCTGATCG ACACGCCCTT GCCCGAGGCG CCGGTGATCG TCGACGTCGG CTGCGGCCAA
GGCATTTCAT TCCGCTTGCT CGCCGATGCG TTCAAGCCGC GCCGCCTTGT CGGCATCGAC
TTCCATGAAC CGTCGTTGAC GCTCGCCGCT CAGGCGGCAA ACGCCTGCCG CGACAAGCTG
GCGGATATCG AACTGCTGCA CGGCGACTGC GCGAAACTGC CGCTGCCCGA CGCGAGCGCC
GATATCGTGT TCTGCCATCA AACTTTTCAC CACCTCGTCG AGCAGGACCA CGCGCTCGCC
GAGTTCCATC GCGTGCTCAA ACCGGGCGGC GTGCTGCTCT TCGCCGAATC CACCGATGCG
TACATCAAAT CGTGGGTAAT CCGGCTCCTG TTCCGTCATC CGATGCACGT GCAAAAGAGC
GCCGGCGGCT ACCTCGACAT GATTCGCCGC GGCGGCTTTA ACTTCAGCGA GCGCAACGTG
TCGCTGCCCT ACCTCTGGTG GAGCCGCGCG AAAGACTTCG GTCTGCTCGA ACGGCTCGGC
CTGTCTCATC CGCAACCCGG CAAGCGTCGC GAAACGCTGG TCAATGTCGC GGCGGTCAAG
CCGGTTAATC CGTAG
|
|---|
| Protein sequence | MSPSETSSVP FVPETAFGIW FLRTYTWEHH VLRVAINDLK RLIDTPLPEA PVIVDVGCGQ
GISFRLLADA FKPRRLVGID FHEPSLTLAA QAANACRDKL ADIELLHGDC AKLPLPDASA
DIVFCHQTFH HLVEQDHALA EFHRVLKPGG VLLFAESTDA YIKSWVIRLL FRHPMHVQKS
AGGYLDMIRR GGFNFSERNV SLPYLWWSRA KDFGLLERLG LSHPQPGKRR ETLVNVAAVK
PVNP
|
|---|
| |