Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_2820 |
Symbol | |
ID | 6282986 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 3188170 |
End bp | 3188700 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642622382 |
Product | NUDIX hydrolase |
Protein accession | YP_001896438 |
Protein GI | 187924796 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2816] NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.202234 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.119996 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAAT ACCGATTTTG CCCACGCTGC GCCACGCCTT TGACCCAGCG CGCCGACGCC GAACACGAAG GCGGCCGCAT CCGCCAGAGC TGCCCTGATC CGACGTGTGG CTACGTCCAC TGGAACAACC CGCTGCCGGT GGTGGCGGCG ATCGTCGAAT ACGAAGGCAA GATTCTGCTG GCGCGCAATG CCGCCTGGGC GGAGGGCATG TTCGCGCTGA TCACGGGCTT CCTCGAAAAC GGCGAGACGC CGGAAGAGGG CATTGCCCGC GAAGTGCTCG AGGAAACCTC GTTGCGTGCG GAGACGGTCG AACTGATCGG CGTGTACGAA TTCATTCGCA AGAACGAACT GATCATCGCG TATCACGTGA AGGCGTACGG CACGATTGCG TTGTCGCCGG AATTGCTGGA GTACCGGCTG GTCGAGCCGG CCAAATTGCG GCCGTGGCGC GCGGGCACCG GCCAGGCGCT CGGCGAATGG ATGCGGCGGC GCGGCCTGCC GTTCGAGTTC GTCGAAAGAC CGGGGCAGTG A
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Protein sequence | MTEYRFCPRC ATPLTQRADA EHEGGRIRQS CPDPTCGYVH WNNPLPVVAA IVEYEGKILL ARNAAWAEGM FALITGFLEN GETPEEGIAR EVLEETSLRA ETVELIGVYE FIRKNELIIA YHVKAYGTIA LSPELLEYRL VEPAKLRPWR AGTGQALGEW MRRRGLPFEF VERPGQ
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