Gene Bphyt_2820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_2820 
Symbol 
ID6282986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3188170 
End bp3188700 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content64% 
IMG OID642622382 
ProductNUDIX hydrolase 
Protein accessionYP_001896438 
Protein GI187924796 
COG category[L] Replication, recombination and repair 
COG ID[COG2816] NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.202234 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.119996 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAT ACCGATTTTG CCCACGCTGC GCCACGCCTT TGACCCAGCG CGCCGACGCC 
GAACACGAAG GCGGCCGCAT CCGCCAGAGC TGCCCTGATC CGACGTGTGG CTACGTCCAC
TGGAACAACC CGCTGCCGGT GGTGGCGGCG ATCGTCGAAT ACGAAGGCAA GATTCTGCTG
GCGCGCAATG CCGCCTGGGC GGAGGGCATG TTCGCGCTGA TCACGGGCTT CCTCGAAAAC
GGCGAGACGC CGGAAGAGGG CATTGCCCGC GAAGTGCTCG AGGAAACCTC GTTGCGTGCG
GAGACGGTCG AACTGATCGG CGTGTACGAA TTCATTCGCA AGAACGAACT GATCATCGCG
TATCACGTGA AGGCGTACGG CACGATTGCG TTGTCGCCGG AATTGCTGGA GTACCGGCTG
GTCGAGCCGG CCAAATTGCG GCCGTGGCGC GCGGGCACCG GCCAGGCGCT CGGCGAATGG
ATGCGGCGGC GCGGCCTGCC GTTCGAGTTC GTCGAAAGAC CGGGGCAGTG A
 
Protein sequence
MTEYRFCPRC ATPLTQRADA EHEGGRIRQS CPDPTCGYVH WNNPLPVVAA IVEYEGKILL 
ARNAAWAEGM FALITGFLEN GETPEEGIAR EVLEETSLRA ETVELIGVYE FIRKNELIIA
YHVKAYGTIA LSPELLEYRL VEPAKLRPWR AGTGQALGEW MRRRGLPFEF VERPGQ