| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2728 |
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| Symbol | |
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| ID | 6284253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 3081345 |
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| End bp | 3082265 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642622288 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001896346 |
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| Protein GI | 187924704 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCAG CTTCGTCGAG TAGCTCGCCG CTCTCCAGCG GCTATCGTTC TGTTTTCCGC
GCAGGCCTTT TCACCGGCAA GGTGGTCATC GTCACCGGCG CGGGCAGCGG GCTCGGCCGA
TGCACGGCTC ACGAACTCGC ATCCCTCGGA GCGACCCTGG CGCTGGTCGG CCGAAGCGAA
GACAAGCTGA AAGCGGTGCA AGCCGAACTG GCGGCGGATC ATCCGTCCTC CGCCATCGGC
CACAAAATTT ACTCTTGCGA CATCCGCAAC GAGCAGCAGG TGCGTGAAAC GATCGCTTCG
ATCATCACGG ATCTGGGTCA CGTGGACGGC CTTTTCAACT GCGCGGGCGG CCAATTCCCC
GCGAGGCTCG AAAACATCTC CCTGAACGGT TGGGACGCGG TCGTGCGCAA CAATCTGCAC
GGCACGTTTC TGATGTCCCG CGAGTGCTAT ACCCAATGGA TGCAGCATCA CGGCGGCGCG
ATCGTGAACA TGCTGGCGGA CATCTGGGGC GGCATGCCCG GCATGGGGCA CTCCGGCGCG
GCGCGTGCGG GCGTATGGAA CTTCACAGAA ACGGCTGCTT GCGAATGGGG CCACGCAGGC
GTCAGAGTCA ACGCGGTCGC GCCCGGCTGG ATTGCGTCAG CGGGCATGGA CAGCTACAAC
GAAGAGTACC AGGCGCTACT GCGCACGCTG AAGCATAAGG TGCCGTTGCA GCGTTTCGGC
ACGGAATCGG AACTCGCCAG CGCGGCGGTG TTTCTGTTGT CGGAGGCGTC GGCGTTCATC
AACGGTACGG TGATCCGTGT CGACGGCGGC GTGCCGAACG CGCGCCATTC ATGGCCGCTC
GCTGAAGCGC AGCGTACGAT CGAATATAAC GGCTTCCCGC GCTATCAACC GCCGACGGGC
TTGCAGGAGC AGACACGATG A
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| Protein sequence | MPAASSSSSP LSSGYRSVFR AGLFTGKVVI VTGAGSGLGR CTAHELASLG ATLALVGRSE
DKLKAVQAEL AADHPSSAIG HKIYSCDIRN EQQVRETIAS IITDLGHVDG LFNCAGGQFP
ARLENISLNG WDAVVRNNLH GTFLMSRECY TQWMQHHGGA IVNMLADIWG GMPGMGHSGA
ARAGVWNFTE TAACEWGHAG VRVNAVAPGW IASAGMDSYN EEYQALLRTL KHKVPLQRFG
TESELASAAV FLLSEASAFI NGTVIRVDGG VPNARHSWPL AEAQRTIEYN GFPRYQPPTG
LQEQTR
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