| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2679 |
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| Symbol | |
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| ID | 6281400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 3026634 |
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| End bp | 3028508 |
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| Gene Length | 1875 bp |
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| Protein Length | 624 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642622240 |
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| Product | putative accessory processing protein |
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| Protein accession | YP_001896298 |
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| Protein GI | 187924656 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3914] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGAAT CCACTTTTTC GCTCGATCAT TTCGAGCAGC TCGTCTACAC GCGGCAGCAT
GTAAAAGCCG CGATCCAGTT CATTGCCGCG CTGGCGCTTC TGCAGCAGAA GCGCGGCGAG
CTGGACGGCA GCTTTCGCGC CTCGGGCATG GCCGATCTGC CGCCTGCCGA GCAACGCAAG
CGCTTCTGCA CACGCCTCGC GAGCGCGGCT TCAACCCTGT TCGCGGACCC GGCATTCCAG
TTGCCGCCCG AGTGTTTCAG ATTGCTTCTG ACACTGCACG AATGGGTTGG AGTGGTGTTT
GCCTGCACGC CGTTCGGCAA TGCGGACCAC GTAAGCCGTC ACCTTAATCC GCGCGGTCCG
GACAACACGC AGTTTCTGCT TGGCGACAGC TTTATCGAAA AACTGTGCGT GCTTTATTCG
ACCGAGTCCG AACTGGAACT TAACTTCGCC GCGCTGTGGG CTTATGACAA ATCGCTCGCC
GCCTGTCTAG CACTCGTTTT GCTGGCGCCG GTATTCAAAG GCTCGGCGAG CGCGCACCTC
AAACGCGAAG CGCTCATGGA ATGGCTGCCC GGCAAACTGC AGCAGATCGA CGACCTCGAC
GACCTGCCCA CCGCGCTGCT GCATAACGCG TATATGTTCT GCAGCTACGC GGACACGCCG
CGGCGGCACG AGATCAAGCG GGACATCAAC GCGCTGGTCC GGCGCAAGCT GGACCAGTTG
GGACTGACCG ATATTCCCGC GCCACAACTG GCGCGCGCGA AAAGCCGCAA GCAACGCGGC
AAAAAACCGC TCATGCTGGT CGTGCTCGAG TGGTTCAGCG GCGCCCATTC GATCTACCGC
ACGCACTCGC TCACGCTCGA AGCCGCGCGC GAGCATTTCG AAGTGGTGGC ATTCGGCTTC
GGCTACGCCG TGGACGATGT CGGGCGCGCG GCGTTCGACC GTTTCATCGA ACTTGAAGAG
CCGGAATATA TCGGCGAGTG TCTTAAAACG ATTCGCGATT TCGCCGAGGC GGAACAGCCC
GACGTGCTTT ATATGCCGAG CGTCGGCATG TTCGCGCTCA CGGTGTTCAT GTCCAACCTG
CGCGTTGCGC CGCTGCAGAT CGCCGGCCTC GGCCACCCGG CCACCACGCA CTCCGACAAG
ATCGATTACG TCAGCGTGGA GGAAGACTAC GTCGGCAACC CTGCCTGTTT CAGCGAGCGT
CTGATGAAGC TGCCGAAAGA CGGTCAACCG TACCGGCCAT CGGTTGCGCT GCCGGACATC
GTCGCCGAGA TTCCGCCGTC ACGCGAGACG CTGGAGATCG TCATCACGGC CAGCGCAATG
AAGCTCAATC CCGGCTTTCT CGAAACGTGC CGTGAAATCG GCGAGCGCGC GGCGACGCCG
GTCCAGTTTC ATTTCATGAG CGGCGTGCCG TTCGGTTTAC CGCTCGAACG CATGCGCGAC
GTGATCCGCC AGACGCTGCC GCGCGCCTTC GTGCATAGCT TTCACGAATA CGCGGGCTAC
CTGTCGCGCG TCAATCGCTC CGATCTGTTC CTCAGCCCGT TTCCGTTCGG CAATACCAAC
GGTATTGTCG ACGCGCTTAC GCTGGGTTTG CCCGGCATCT GCAAGCGCGG GCCGGAAGTG
TTCGAGCGGA TCGACGGCGC GCTGTTCGAG CGCGTGGGCA TGCCGTCGTG GACCACGGCA
GAGAGCGGCG AGGATTACAT CGCCGCCGCT GTGCGAATGA TCGACGCCCA CGGCGAGCGC
ACGGCCTTGC GGCAGCGTCT GATCGATACG CGGGCGGTGG AGCGTTGCTT TGAAGGGCGT
CCGCAGGCGT TCGCGGAATG CGTGCTGGGG CGGATGCGGG CGAAGCAACG CAAGCGAGAC
GAGGCGATGG CTTGA
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| Protein sequence | MEESTFSLDH FEQLVYTRQH VKAAIQFIAA LALLQQKRGE LDGSFRASGM ADLPPAEQRK
RFCTRLASAA STLFADPAFQ LPPECFRLLL TLHEWVGVVF ACTPFGNADH VSRHLNPRGP
DNTQFLLGDS FIEKLCVLYS TESELELNFA ALWAYDKSLA ACLALVLLAP VFKGSASAHL
KREALMEWLP GKLQQIDDLD DLPTALLHNA YMFCSYADTP RRHEIKRDIN ALVRRKLDQL
GLTDIPAPQL ARAKSRKQRG KKPLMLVVLE WFSGAHSIYR THSLTLEAAR EHFEVVAFGF
GYAVDDVGRA AFDRFIELEE PEYIGECLKT IRDFAEAEQP DVLYMPSVGM FALTVFMSNL
RVAPLQIAGL GHPATTHSDK IDYVSVEEDY VGNPACFSER LMKLPKDGQP YRPSVALPDI
VAEIPPSRET LEIVITASAM KLNPGFLETC REIGERAATP VQFHFMSGVP FGLPLERMRD
VIRQTLPRAF VHSFHEYAGY LSRVNRSDLF LSPFPFGNTN GIVDALTLGL PGICKRGPEV
FERIDGALFE RVGMPSWTTA ESGEDYIAAA VRMIDAHGER TALRQRLIDT RAVERCFEGR
PQAFAECVLG RMRAKQRKRD EAMA
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