| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2542 |
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| Symbol | |
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| ID | 6281462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 2873031 |
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| End bp | 2874119 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642622101 |
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| Product | transcriptional regulator, XRE family |
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| Protein accession | YP_001896161 |
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| Protein GI | 187924519 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1426] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.150986 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00310963 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTGAGC CGCAGCACCC GCAGCCGCAG GACACAGACA CGAACGAAGG CCATCCGGCG
CCAGTCGCAC GGGCGGCGGT GCAGCCTGTT GTGCAGCCGG CCATGGATTC GTTGGCGGCG
GTTGGCGCGC GCTTGACCCA ATTGCGTGAA TCGAAAGGTT GGACGATCGA CGACGTGTCG
GCGCGTCTGA AAGTGTCCGT CATCAAGTTG CGCGCGCTCG AATCGGGCGA CATCAGCCAC
TTGCCGGATA CGACTTTCGC GCTCGGCGTG GTGCGCAGCT ACGCGAAAAT GCTCGGTGCG
GATCCCACGC CGTTCACGGC GGCACTGCGC CGCGAAAAGG GTGTGCCCGC GCCGGATCTG
TCAATGCCGG CCTCGTCGGG TAGGGATTTG CCGCGCGGCA AGGTATCGCT CTCGCTGGGC
GGCAGCGGGC AAAAGAGCCG CTCGTGGTTG TGGGGCGTGG CGGCGGTGAT CGTCGCGGTG
ATCGCGCTTG GCATGTGGCA TACCAATGGC GGCGATTCGT CGGCCTGGCT GGCGCGCTTG
AAAGCGAGCG CGAATGGCGC CGCTGGCGGC TCGACCGGCG CATCGGGCGC GGTGGCGCAG
GGCCAGTCGG CAGGTTCGGA AGCGACTGCG GAAGAGGCTG CTTCAGCGAC GGACACGCAG
GCGGCGGAGA ATGCAGCGTC GGCTACGCCG ATGCCCGCGC CACTCGCCAC GGGTGCGGCA
CCTTCGTCGG CGCCGGCAGT CACGGCAATG ACCGCCGCGC CGAAGACGGG CTCACAAGCA
CCGGCCCTAG CAACTGCGCC GGGCGCGAGC GCGCCGGCGG CTACGGTGAC GCCGGCTGCA
GGTCAGTCGA TCGTTGCGTT GAGCGTCAAG CAGGATAGCT GGTTCAGCGT GCGTGGCAAA
GATGGCAAGG AAGTGTTCTC CGGCCTCGTG CATGCGGGCG ATACCAAGAC AGTGACGGGC
GAAGCGCCGT TCAAGGTCAC GCTCGGCAAC AGGGCCGGCC TCGACTCGCT GACGCTCGAT
GGCCAGCCGG TCGATCCGTC GAAATATGCG GCGGCCAAAG GCAACGTGGC GCGTTTCGCG
CTGCCTTGA
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| Protein sequence | MSEPQHPQPQ DTDTNEGHPA PVARAAVQPV VQPAMDSLAA VGARLTQLRE SKGWTIDDVS
ARLKVSVIKL RALESGDISH LPDTTFALGV VRSYAKMLGA DPTPFTAALR REKGVPAPDL
SMPASSGRDL PRGKVSLSLG GSGQKSRSWL WGVAAVIVAV IALGMWHTNG GDSSAWLARL
KASANGAAGG STGASGAVAQ GQSAGSEATA EEAASATDTQ AAENAASATP MPAPLATGAA
PSSAPAVTAM TAAPKTGSQA PALATAPGAS APAATVTPAA GQSIVALSVK QDSWFSVRGK
DGKEVFSGLV HAGDTKTVTG EAPFKVTLGN RAGLDSLTLD GQPVDPSKYA AAKGNVARFA
LP
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