| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2526 |
|---|
| Symbol | |
|---|
| ID | 6282863 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 2852718 |
|---|
| End bp | 2853665 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642622085 |
|---|
| Product | conserved hypothetical lipoprotein |
|---|
| Protein accession | YP_001896145 |
|---|
| Protein GI | 187924503 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0092421 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.00000000567204 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGTTCCTCT CACGTGGCGT GTTTTTCGCG TCGTGCGCGT CGTGTCTACT GGCCGTGGCG
CTGGCGGTGT CGACGCCGGC CATGGCGCAG TCCGTTACGC CGGCGAGCAA CAGCAGCGCG
CGGCCCGCGG GCGCTTCGGC GCCGGCCGCC GCGTCGGGTG CGCAGGCCAC GACGGCCAAA
GGCCCCGCGA ACGCCGAGAA CACGGATAGC GCCGGCAACG CGGTAACGTC GGATAGCGAC
TTCGACGCGC GGCAAAAAGC CCTCGATCAG CGCACCGAGG AGAACAACTA CCGCTACGGC
GTCGCGGAAC ACGACTGCTA TGCAAAGTTC TTCGTCAATT CCTGCCTGAA CAAGGCGCGC
GACAGCATGC GCACGGTGCA GGCCGACATT CGCAAGGAGC AGCTCGCGCT CGACGGCGAA
CAACGCACGC AGCGCGCTCG CGTGCGTGAC GAACAGGCGG CGATCAAGCG CGCGCAGGAT
GAAGCGAGCG CGCCGCAGCG TGCCGCCGAC GACGCGCGCA ACGCGCAGGC GTACGAAGAC
AAGCAGAAGC AGCATCAGAT CGATCAGGCG CAGCGCGCCG CCGAGGCGCC GCAGCGCAGC
GCGAATGCGC AGGCCTATCA GGACAAACTG CGTCAGCACG CGCTGGATCA GGCGCAGCGC
GGCATCAGCC CGTCGCAGGC GGCGGCCAAT CGGCAGGCGT ACGATCAGAA GCAGGGCGAC
TTCCAGCGCA AGCTCGACGA GGCGCGTGCG CAAGGCGCGC AGAAGGCCCA GGAGCGCGTG
GAGAAACAGC AGAGCTTCCA GAAGAAGCAG GCGGACGCCG CGCAGCACAA GGCCGACGTC
GAGGCGCGTC AGAAGCAGGC GGCCGAGAAG GCCGAGCAGA AGCGTCAGGA TGCGCTGAAA
CAGCAGCAAA TCGAAGAGCA GCAAAAGCAG CAGCAACAAC AGCAGTAA
|
|---|
| Protein sequence | MFLSRGVFFA SCASCLLAVA LAVSTPAMAQ SVTPASNSSA RPAGASAPAA ASGAQATTAK
GPANAENTDS AGNAVTSDSD FDARQKALDQ RTEENNYRYG VAEHDCYAKF FVNSCLNKAR
DSMRTVQADI RKEQLALDGE QRTQRARVRD EQAAIKRAQD EASAPQRAAD DARNAQAYED
KQKQHQIDQA QRAAEAPQRS ANAQAYQDKL RQHALDQAQR GISPSQAAAN RQAYDQKQGD
FQRKLDEARA QGAQKAQERV EKQQSFQKKQ ADAAQHKADV EARQKQAAEK AEQKRQDALK
QQQIEEQQKQ QQQQQ
|
|---|
| |