| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2405 |
|---|
| Symbol | |
|---|
| ID | 6282255 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 2707357 |
|---|
| End bp | 2708394 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642621959 |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_001896025 |
|---|
| Protein GI | 187924383 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.92999 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCAAT CGGACACATC GGAACGCTGC TTTCGAATCG GCTTGCCGAA TCGCGCTGAC
GCGCTGTCCA CCAGTATTGC CGCGAGCTAC GTAGGCATCA TGGCCTTCAT GGCGGTGGCG
AGCGAGGGCA GTTTCGCCAA GGCCGGCGAA CGTCTGGGCG TCGGCAGATC GGCCGTGAGC
CGCAACGTCC AGAAGCTCGA AACGCAGTTG AGCACGCGGC TATTCCTGCG CACCACGCGC
AGCACGCAAC TGACGCGTGA AGGCCAGCGG TTCTTCGAGA ACTGCCACCA GGGTGTCTCG
CACCTCGTGG AGGCCATGAA CGACATGCTG GAGCTTCGCG AGGGACCGCC TCGCGGCCTG
GTGCGCATCA GCTCGACGGT CGGCTTCGGC AGGAAAGTGG TGGGACCGTT GCTGGAACAG
TTTGTCAAGG CCTATCCCGA CATCGCCGTC GATCTGCTGC TCGACGATCG GCCGATGGAC
TTCGCCTCCG AGCAGATCGA CGTGGCGTTC CGCAGTGGAC GCATCGAGGA TTCGAGCATC
ATCGCCAAGC AGCTGATTCC GATGCAGATG GCGCTCTGCG CCGCACCATC TTACGTGGCA
GCGCACGGTC TGCCGCAAAC GCTGGACGAG TTATGCCAGC ATGATTGCAT CAACTTCCGA
CTCTCCAGCG GCCGGGTGTT CGAGTGGGAG TTCAAGGTAG ACGGCCACGT GCGCAAATAC
CTGCCCACTG CCCGCCTCAC GTTGAACGAT GCCGACCTGG TCTTACACGC GGTTCTGCAG
GGCTCGGGCA TTGCGCAGAT GGCCGGCTAC CAGATCCGCG ACCACATTGC CGCCAATGAA
CTCGTCGTGG CGCTGGCGAG GCACGTGCCC GACGATGGCG GGCACTACAT CTGCTATCTG
AGCCGACGGC ACTTGCCCAC GCGCATCCGT GTTTTTATCG ACTTTATGAC CGAGCAGATC
CGCGCGCTCG ATCTGAATTG CCTGAGCGGC TTTAATGCTG AAGCAACCGG ACCATCGGCA
GCGGGAATGG CGGCCTGA
|
|---|
| Protein sequence | MNQSDTSERC FRIGLPNRAD ALSTSIAASY VGIMAFMAVA SEGSFAKAGE RLGVGRSAVS
RNVQKLETQL STRLFLRTTR STQLTREGQR FFENCHQGVS HLVEAMNDML ELREGPPRGL
VRISSTVGFG RKVVGPLLEQ FVKAYPDIAV DLLLDDRPMD FASEQIDVAF RSGRIEDSSI
IAKQLIPMQM ALCAAPSYVA AHGLPQTLDE LCQHDCINFR LSSGRVFEWE FKVDGHVRKY
LPTARLTLND ADLVLHAVLQ GSGIAQMAGY QIRDHIAANE LVVALARHVP DDGGHYICYL
SRRHLPTRIR VFIDFMTEQI RALDLNCLSG FNAEATGPSA AGMAA
|
|---|
| |