| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2363 |
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| Symbol | |
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| ID | 6282627 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 2654752 |
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| End bp | 2656233 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642621919 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001895985 |
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| Protein GI | 187924343 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.667022 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCGAA CAATCTACGC CACGAAAAGC ACCAGATCCT CACGCCACGC GCTGGTTCTG
GTGCCCGCGC TGACCGTCCT GGTCCTCGGC ATACTGTGGG TCACCATACT GTTGCGCCTG
CAGGTCGAGA AGGCTTCCGT GATGCGCGAC ACGCGCGTGG CGGCCCGCAC GCTAGCCGAT
GCCTTGGAAA CCCATACGCT GAAAACTGTC CACGATGTCG ATGAGATCGC GTTGCTGGTC
AAATACGGTT ACGAACGTAC GCCGCAAAGC TTTGACCTGG CAGCGTACCG GGCATACGGA
TTGATTACCG CGGACACCGC CCTGCAGGTC ACCATAGCGG GTGCCGACGG CCGCGTGATT
ACATCGACTT TGCCATTTAC GGGTACGGTC GATCTCAAGG ACCGGGAGCA TTTCCGGGTT
CACCTGTCGC CTGAAAATAT CGGGCTCTTC ATCAGCCAGC CTGTGATTGG ACGTATTTCC
AGGCAGTGGT CCATTCAGGC AACCCGCCGT ATCGACCGTC CCGACGGAAG TTTCGGTGGA
GTGGTGATCG TCTCGGAAGA CCCGGCGTAT CTGACCGATG GCTTCTACAA CAGTGCTGCG
CTGGGCGAGC GCGGCATGAT TGCCGTTCTG TCCGGTCGTG GGTTCATGTT GTCGCGTCGT
GCGGGCAATT CGCCGAGCCG CTCTGGCGAG GCACTGCCGA GCAGCTATGT GCCGCTCGGC
AAGACGGGGC TCGCCGACTT CGTCGATCCG ATCGATCACA TCGAACGTGT CGTAGCAAGT
CGCCATCTCG AGAAATATGG TTTGACGGTG GTCGCCGGTC TTTCTGTGGA TGAGGCGCTG
GACGATTACT TCAGGATGCG CCGCGTGTAT GTGACGATGG CCTCGACCAT CACGTTGATG
CTCGCTGCAC TATCGGCCTG GATTACTGCT CTGATCGTCA AACTCCTCAA CGGCAAGGAG
GAATTGCGGC GTCTTTCTCA AACGGACCGA CTGACGGATT TGCCGAACCG CGGCAAGATC
GTGGATCTGC TCGAGGAGGC GATCGCGGCG CCGGGTGCAG TCGGAAAAGT CGCTGTCGTT
TTTGTCGATC TGGATAACTT CAAGGCGCTC AACGATACGT ACGGCCACCA GTGCGGCGAC
GAGGTTCTGG CCTTGGTGGC GGCTCGCCTG CACACTACCG TACAGGAGCG TGGCGTAGTG
GGGCGCCTCG GCGGAGATGA ATTCCTGGTT GTACTCGAAG TTCACGCTAT AACCGGCGTA
GTCGGGCAGA TGGTCGTTGA GTTGACGGCT GCTCTCCAGG CTCCGCTGAT TTCACGCTGG
GGGGTCGAAG CGGTCGGTGC GAGCTTTGGC ATGGCTATTC TGGAAGCGGG CGAGGACTCC
AAAGAACTCA TCAGGAAGGC CGACTTCGCG ATGTACCAGG CCAAGAATCG CGATCATGCT
TGTCGAATAG ACTCCAAGAC AGACCGCATT CTTGCCGGAT GA
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| Protein sequence | MDRTIYATKS TRSSRHALVL VPALTVLVLG ILWVTILLRL QVEKASVMRD TRVAARTLAD
ALETHTLKTV HDVDEIALLV KYGYERTPQS FDLAAYRAYG LITADTALQV TIAGADGRVI
TSTLPFTGTV DLKDREHFRV HLSPENIGLF ISQPVIGRIS RQWSIQATRR IDRPDGSFGG
VVIVSEDPAY LTDGFYNSAA LGERGMIAVL SGRGFMLSRR AGNSPSRSGE ALPSSYVPLG
KTGLADFVDP IDHIERVVAS RHLEKYGLTV VAGLSVDEAL DDYFRMRRVY VTMASTITLM
LAALSAWITA LIVKLLNGKE ELRRLSQTDR LTDLPNRGKI VDLLEEAIAA PGAVGKVAVV
FVDLDNFKAL NDTYGHQCGD EVLALVAARL HTTVQERGVV GRLGGDEFLV VLEVHAITGV
VGQMVVELTA ALQAPLISRW GVEAVGASFG MAILEAGEDS KELIRKADFA MYQAKNRDHA
CRIDSKTDRI LAG
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