| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2192 |
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| Symbol | |
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| ID | 6282645 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 2472756 |
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| End bp | 2473877 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642621750 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_001895816 |
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| Protein GI | 187924174 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAAATA GCCTGATTTC AGCGCGGCGG CCGCGCCTTG CCGCTGGTGC GATTGCTATC
GCCTGCGCCG CGCTGCTGTG CGCCGGCGCT CATACGGCCA ACGCCGCAAC GCCCGCCGCC
GACGCCGCCG AGCAACCCGT GGTCGCCGTG CAAACCGTGC GCGTGCAGCG CGCCGAGATC
GCGCAGCCGG TGCGGGCGTA TGGCATCGTC GCCGCGTCCG CATCGAACCT CACCACCGTC
AACCTGCCGT ACACCGCGCG CATCGTGCAG ATGCGTGTGC AGTCCGGGCA AACGGTGACG
CGCGGCACGC CGCTCTTCGT CGTGCAGGCG GACCCTGCCG CCGTGCTCGC GGCCACCCAG
GCAAAAAGCG CCGTGACGCT AGCACAAGGT GAACTGGCGC GCACGCAATC GCTGTACGAC
AAAGGGCTCG CCACCCAATC GCAACTCGCC AGCGCCCGCA AGGCCGCCGA CGACGCGCAG
CAGGCGCTCG CCGCTCAAAA CCAGACGGGC GTGGCGAACG GCAACAAGAT CGTCACCGCG
CCTAACGACG GCGTCGTGCT GCAAGTTTCG GCCGCTCAAG GCGATCAGGT CCAACCCGGC
ACGGCGATCC TGCAACTCGC CGGCGGCAGC GGCAAGGACG CGCGCGCCAA CGTGATGCTC
GGCGTCGAGC CCGCCGATGC CGCCGCGATC CACGCCGGCG ACATCGTCAC GTTGCACGGT
CTGTCGACGT CGCTCGCAAA GACTTCGGCG AACGGCCACG TGGCACTGGT GGGCGCCTCG
GTCGATCAGC AGAGCCAGCT CGTCGACGTC GGCGCGAACG TGCCGCTTGG TCAGACGGCC
TTCATTCCCG GCACGCGCGT GAGCGCCGAC ATCGCGACCC GCAACGGCAC GCACTGGATC
GTGCCGCGCG CCGCCGTGCT GAAAGACGGC AAAGGTGCCT ACGTGTTCCA GATCACGCCG
CAGAACAAGG CGCGCCGCGT AGCGGTGACC ATGCAGGTCG AGAACGGCGA GCGCTACGGC
GTGGATGGCG CGCTCGACGC GGCGCAAGGC CTCGTGGTCA GCGGCAACTA TGAGTTGAAG
GACGGCATGG CGGTGCGCAC CAGCGGAGGC GCGCCTCGAT GA
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| Protein sequence | MRNSLISARR PRLAAGAIAI ACAALLCAGA HTANAATPAA DAAEQPVVAV QTVRVQRAEI
AQPVRAYGIV AASASNLTTV NLPYTARIVQ MRVQSGQTVT RGTPLFVVQA DPAAVLAATQ
AKSAVTLAQG ELARTQSLYD KGLATQSQLA SARKAADDAQ QALAAQNQTG VANGNKIVTA
PNDGVVLQVS AAQGDQVQPG TAILQLAGGS GKDARANVML GVEPADAAAI HAGDIVTLHG
LSTSLAKTSA NGHVALVGAS VDQQSQLVDV GANVPLGQTA FIPGTRVSAD IATRNGTHWI
VPRAAVLKDG KGAYVFQITP QNKARRVAVT MQVENGERYG VDGALDAAQG LVVSGNYELK
DGMAVRTSGG APR
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