| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2176 |
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| Symbol | |
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| ID | 6281917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 2452334 |
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| End bp | 2453686 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642621734 |
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| Product | putative TRAP-type uncharacterized transport system, periplasmic component protein |
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| Protein accession | YP_001895800 |
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| Protein GI | 187924158 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCGC AGCGTCCGCG TCCCCCGCAG TTTCCCGGCG AAGAGCCGCA TGCCGAGTGG
CGCGACCATA CCCTGCTGTA TGTCGCCGTG GCGACGGTCA TCATCCTGAT GGTCACGCTG
GTCGTCTGGC TGATCGATCC GGCGCCGCCC AGGACGATCA CCCTAAGCGC CGGGCCGCAT
GACAGCTCGT TTTTCGTCGC CGCCGGGCAG TACCGGAAAA TCCTCGCCCG CAACGGCATC
AAGCTGAACG TGCTGGAGTC CGACGGCTCC GTGCAGAACC TGCAACGTCT GCTGGATCCG
AAGCAGCACG TCGACGTCGC GCTCGTGCAA GGCGGCGTGG CCGACGGTCT CGACACCACG
TCGCTGATGT CGCTCGGCAG CGTTTTCTAT ATTCCGGTGG TGGTGTTCTA TCGCGGTTCG
GGCTTGAGCC AGCTTTCGCA ACTGGAAGGC AAACGGATCG CCGTGGGCCG CGAAGGCAGC
GGCACGCGCA TGCTGGCGCT CAAACTGCTG GATGCGAACG GCATCGAGCC GGGCGGCGAT
TCCACGCTGG TCCCGAGCGA CGGCCTGCAG GCCGCCACCC AGCTGGTGGC GGGCGAGGTG
GACGCGGCGA TCCTGAACGG CGACTCGGCC ACGCGCGGGC TGATGCTGCG CCTGCTCAAG
GTGCCCGGCG TCTCGGTGAT GAACTTCGCG GAGGCGAGCG CCTATACGCG TCTTTTTCCG
TATCTGGACC AGATCGACTT GCCGGCCGGC GTGCTGGATC TGAAGCGCCG GATTCCGCCG
GAAACGGTGC ATCTGATCAG CCCGACCGTC GAACTGGTGG CCCGCACCAC GCTGCATCCG
GCCATATCCG ATCTGCTGAT CGAAGCGGCG CAGGAAGTGC ACGGCATGCC GGGGCTATTA
CAGCGGGCGG GAGAATTTCC GAGTCCGGTC GCGCGTGAAT ATCAGATCAG CGAGGACGCG
CAGCGCTACT ACAAGACGGG CAAGAGCTTT CTGTACCGCA CGCTGCCGTT CTGGCTGGCG
AGCATCGGCG ACCGTACGCT GGTTCTGCTG CTGCCGATGG CCGTGCTGCT GTTCCCGGCC
ATGCGCCTGA TTCCCGCGCT GTACCGCTGG CGGGTGCGCT CGCGAATCTA TCGCTACTAT
GGTTCGCTGA TTGCGATCGA ACGCGGCGCG CTCGCCGATT CGACCGACGA GGAGCGCAAG
CGGCTCTTCG AGGAACTGGA TCAGATCGAG GATTCGTTGA ATCGGCTGCG CATGCCGCTC
GCATACGCCG ACGCGTTCTA TGTGCTGCGC GAACACGTCG GCTTCGTGCG CAGCCGGCTG
GGGGCTGCGT CGCGGCAAGG CGGCCACGCC TAG
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| Protein sequence | MKAQRPRPPQ FPGEEPHAEW RDHTLLYVAV ATVIILMVTL VVWLIDPAPP RTITLSAGPH
DSSFFVAAGQ YRKILARNGI KLNVLESDGS VQNLQRLLDP KQHVDVALVQ GGVADGLDTT
SLMSLGSVFY IPVVVFYRGS GLSQLSQLEG KRIAVGREGS GTRMLALKLL DANGIEPGGD
STLVPSDGLQ AATQLVAGEV DAAILNGDSA TRGLMLRLLK VPGVSVMNFA EASAYTRLFP
YLDQIDLPAG VLDLKRRIPP ETVHLISPTV ELVARTTLHP AISDLLIEAA QEVHGMPGLL
QRAGEFPSPV AREYQISEDA QRYYKTGKSF LYRTLPFWLA SIGDRTLVLL LPMAVLLFPA
MRLIPALYRW RVRSRIYRYY GSLIAIERGA LADSTDEERK RLFEELDQIE DSLNRLRMPL
AYADAFYVLR EHVGFVRSRL GAASRQGGHA
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