Gene Bphyt_2097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_2097 
Symbol 
ID6283330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp2362610 
End bp2363470 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content66% 
IMG OID642621657 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001895723 
Protein GI187924081 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.961582 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAA CCGCAATCCA CGTCGAACGC GAACGGCTCG CGTCTGCCAG TACGCCGCAA 
ACGCCACACG TTCCGCTGTT TCGCGAGCCG CGCCTGCGCG CGCTCGCGTG GCGGCTCGCT
CCGTGGGTGC TGCCCGCGCT GCTGTTCGCA CTGTGGGCCG TAGGTTGCGA ACGCGGCTGG
ATCGCCCCGC AGATTCTGCC GCCGCCCGAG CGCGTGTTCG AGACGCTGAT CGAATTGGCG
AGGAGCGGCG ACCTCGCGCG CAATACGCTG GTCAGCCTGC AGCGCGTGCT GCTCGGTTTC
GGTGCCGGCA CGCTGCTCGG CTTCGCACTC GGCGCGGCGC TGGGATTGTC GCGCACGCTC
GAAGCTTATG TGCTGCCGAG CTTCAATGCG TTGGTGCAGA TTCCGGTGCT CGGCTGGCTG
CCGTTTTTGC TGTTGCTCGT GGGCGTGGGC GAACCGCTCA AATACATTCT GATCGCGCAT
GCGGCGTTGG TGCCGGTCAC CTTGAGCACG TTGCAGGGAT TTCGCCAGAC ACCTGCCGCG
TTGAATGAAG TCGCGCGCGT GTTCGAGTAC AGCGGCTGGC AACGGATCGT CTATCTCGTG
CTGCCTGCGG CTGTGCCGAC GCTCGCCACG GGCGTGCGGC TCGCGTTCAC CAAAGCCTGG
CTCGCGCTGG TGGTCGTCGA ACTGGTGGCG TCCTCCGAAG GACTCGGCTA TCTGATCGTC
TACGGCCGGC AACTCTTTCA ACTCGATCTG GTGATGGCGT CGGTGGTTGT GGTCGGCGCG
ATCGGTTACG CGGTGAATCG CGCGCTCGAT GCGCTCGAAG CGCGTCTGCG GCGCGGACAG
CCTTCGGCAT TTCGCGAGTG A
 
Protein sequence
MSETAIHVER ERLASASTPQ TPHVPLFREP RLRALAWRLA PWVLPALLFA LWAVGCERGW 
IAPQILPPPE RVFETLIELA RSGDLARNTL VSLQRVLLGF GAGTLLGFAL GAALGLSRTL
EAYVLPSFNA LVQIPVLGWL PFLLLLVGVG EPLKYILIAH AALVPVTLST LQGFRQTPAA
LNEVARVFEY SGWQRIVYLV LPAAVPTLAT GVRLAFTKAW LALVVVELVA SSEGLGYLIV
YGRQLFQLDL VMASVVVVGA IGYAVNRALD ALEARLRRGQ PSAFRE