| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2082 |
|---|
| Symbol | |
|---|
| ID | 6282693 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 2348622 |
|---|
| End bp | 2349062 |
|---|
| Gene Length | 441 bp |
|---|
| Protein Length | 146 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642621643 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_001895709 |
|---|
| Protein GI | 187924067 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1051] ADP-ribose pyrophosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.494024 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGACA CCGTGAAGCA ACGAGCGACT GTTGTCTGCC AGCTCGGCAG GCGAATCCTG
TTGGTCAGCC GGGAAGGCAC CCGCTGGTCG CTACCCGGCG GCAAGCCCGA GGCAGGGGAG
GATCTGCGCG AAACCGCGCT GCGCGAATTG ATGGAGGAAA CGCGCCTTCA AGCGATGGAC
ATGCGGTACC TGTTCGGCTT CACCGGCATC CACACTTGCC ATCACGTATT TGTCGCGACG
CTTGCCGACG GCGACGAGCC GATGCCCAGC AACGAAATCA CGCGTTGCAC CTGGGCGAAG
GTGACGGAGG TGGGCGTGCT GCCGGTCAGC ACGTCAACGA AGGGAATCGT TGACGTGCTG
ACCATCGCGT CCAACGGCGC ATCGAGACTG CCGAGCGACT ACGACCAGGT AGTGGATTTC
GGAGCCCACG TCTCGCGCTG A
|
|---|
| Protein sequence | MRDTVKQRAT VVCQLGRRIL LVSREGTRWS LPGGKPEAGE DLRETALREL MEETRLQAMD
MRYLFGFTGI HTCHHVFVAT LADGDEPMPS NEITRCTWAK VTEVGVLPVS TSTKGIVDVL
TIASNGASRL PSDYDQVVDF GAHVSR
|
|---|
| |