Gene Bphyt_2075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_2075 
Symbol 
ID6281376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp2340763 
End bp2341980 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content67% 
IMG OID642621636 
Productprotein of unknown function DUF917 
Protein accessionYP_001895702 
Protein GI187924060 
COG category[S] Function unknown 
COG ID[COG3535] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.416017 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATATG AATTACGCCG GAAAGATCTG GAACCGCTGC TATTGGGGGC AGCGTTCTTC 
GGTAGCGGCG GCGGCGGCAC GATCGAATCC GCGCGGCATC TCGCCGAGCA TTTCGTGACC
GGTGACTATT ACCCCACCGA CACGGTCAAG GTCGTGTCGG TCGACGAGGC CACCGAAGGC
GCGGCCGTCA TGGTCGCCTA CCTCGGCGCG CCCGAAGCGA TCAACTCCGC GACCTATCCG
CTCGGCCCCG TGACGGCCGT GCAGAACGTT CAGGCCCGGC TCGCCTCGCA ATCGACGAAG
CTCGCCTACG TGATGCCGCC GGAAAGCGGC GCGCTGGGCT TCACGGTGGC GGCGCTGGTG
GCGGCGAAGC TCGGCCTCGC GGTGATCGAC GCCGACGGCG CCGGCCGCGC CGTGCCCTCG
CTGCCGATGC TCACCTTCGC GGCCGCCGAG ATCGATCCGC GCCCGGCGTT TCTGGTGAGC
CAGGGCGGCC TGTGCGTCGA GCTCGACGTC ACGCCGCGCA ACAGCAACCA GGGCGGCCCG
ACCCATCAAC GCGACGTGTC GGCGATCGTC GAGCAGATGA TGCGTCCGGT CGTCGCCGAT
CCCGAGTTCG GCCAGTTCGG CGGCCTCGCG ATGTGGGTGA TGAAGCCGGC GGAGATCCGT
CGCGCCACAC CGATTCATGG CACCTTGACG CGCGCGCTGG AACTCGGGCG CGCGTTGCAA
GCCGGCCGGA TCGGCAGCGC GCAGCAGATG ATCGGCTATC TCGCCGAGCA TTGCGGAATC
GCCGCGCGCG CCATCTCGGA GCCCGGCGAA CTGGTTTCGG CCGAGGTCGA TACGAGCGGC
GGCTTCGACG TCGGCAAGGT GCATATTCAG GCCGGCCAGC GGACCTATAC GGTGCTGTAT
CAGAACGAGT CGCTGCTCGC GTGGGACAGC GCCAATCCGC AGCCGATCGT GTTGTCGCCG
GATAGCGTTG CGTATTTCGT CGGCGGCGAA GGTCAGGCGA TTTTCAGCAA CGGCGACCTG
CTCCAGGACG ACGGCTCGTT GAACCCGGTG ATCGGCAAGC GCCCCGTGAC GCTGATCGCA
TGGCGTGCCG AAGCCGAGTT GCGCAAGCCC GGCCTGATTC TCGACAGCTT CATGCAGCTG
CTGAACACGC TCGGCTATCT CGGGCCCTAT GTGCCGCTTG AAACGCTCCA CGCCGCACGC
AAGGGAGAGG CAGCATGA
 
Protein sequence
MAYELRRKDL EPLLLGAAFF GSGGGGTIES ARHLAEHFVT GDYYPTDTVK VVSVDEATEG 
AAVMVAYLGA PEAINSATYP LGPVTAVQNV QARLASQSTK LAYVMPPESG ALGFTVAALV
AAKLGLAVID ADGAGRAVPS LPMLTFAAAE IDPRPAFLVS QGGLCVELDV TPRNSNQGGP
THQRDVSAIV EQMMRPVVAD PEFGQFGGLA MWVMKPAEIR RATPIHGTLT RALELGRALQ
AGRIGSAQQM IGYLAEHCGI AARAISEPGE LVSAEVDTSG GFDVGKVHIQ AGQRTYTVLY
QNESLLAWDS ANPQPIVLSP DSVAYFVGGE GQAIFSNGDL LQDDGSLNPV IGKRPVTLIA
WRAEAELRKP GLILDSFMQL LNTLGYLGPY VPLETLHAAR KGEAA