| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2074 |
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| Symbol | |
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| ID | 6284514 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 2338455 |
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| End bp | 2340773 |
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| Gene Length | 2319 bp |
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| Protein Length | 772 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642621635 |
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| Product | sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | YP_001895701 |
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| Protein GI | 187924059 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.150901 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTACC CCCCTGTCGT TCCGTTTGCC CACGACAAGG CTGATTCGGG CGCCTTCGTG
GGCGGCGCCC CGGCGTTTCG CCAACTGGTC CGGATGATCG ACCGGGTCGC CCCGACCGAT
CATCCTTTGC TCATCTTCGG CCCGACGGGT TCGGGTAAGG AACTGGTCGC GCGCCGGGTG
CATGCGCACA GCCAGCGCCA GGATCAGCCG TTCGTCGACG TCAACTGCGG CGCGATTCCC
GAGAACCTCG TCGAAGCCGA ACTGTTCGGG CATGTGAAAG GCGCGTTCAC CGGCGCGGCC
GAAAACCGCC AGGGACTTTT TCAGCAGGTC GGCAAGGGCA CGCTGCTGCT CGATGAAATC
GGCGAACTGC CGCTCGCGTT GCAACCGAAA CTGTTGCGCG TGCTTGAAAC GCGGACCTTC
CGTCCGATCG GCTCGTCCAC CAGCCTGCAT TTCGCGGGGC GCGTCGTCGC CGCGACCCAT
CGCGACCTGC GCGAACTCGC GCGTGAAGGG CTATTCCGCG AAGATCTGTT CTACCGTCTC
GCGGTGTTCG TGCTCGCCGT CCCCGGACTC GAGCAGCGCA TCGAGGACAT CCCGGCGCTC
GTCACCCACT TCGCAGCGCA GCACGCGCGC CGTCTCGAGT TTTCGCCGGC CGCCATCCGG
CGGCTTTGCC AGCATTCGTG GCCGGGCCAT ATCCGGCAAT TGCGCAATCT GATCAGCCAG
TTGAGCGTGC TCGCCGAAAA CACGCTGATC GATGTCGACT CGCTCGAGCC GTTTCTTGCC
AACGAAACCA GCGGTCCGGT GTCGCGCGCG AGTCTCGCCG ACATGCTGTT GCAACTCGAA
GGCCGCGACA AGCTCGCCGC CGCCGAAGAC CTGCTGATCG ACCGCGCGCT CGAGCGCACC
AGCGGCAACA AGAGCGCGGC CGCCAGCATG CTCGGCGTGG GGCGCAAGAC CATCGAGCGG
CGGCTGAAGT CGCGCGAGGA ACATCACCGG GAAGCGCGCA AGTGTCTCGA ACACGCGAGC
GCGCTGATCG AGGAGTCGAA GTTCGCGGAA GCGATTCCAT TGTTGCGCCG CTGCCTCGAT
CTGCTGCAGA CGCCTCACGA ACAGGAAGCC GTGCGCCGTC TGCAGTTCGA CGCCTACCGG
CTGCTCGGCA TGAGCTTGCG CAGCGTGCAC GGCTGGCTTT ATGCGGAGGC CACCGCCTGC
TACGCCGCCG CGCTGATGGT GGGCGAAGGC GTCTGCGAGC CCGCCGAGAT CGCCGCGATC
CAGTTCGGCA TCTGGACCAC GCAACTGACG ACGCTCCAAC TCAAGCAGGC GCGCGGCACC
GCGCAGAACA TGCTGGAGCG CGCACAGAAC GGCGGCGACC GGGTCTCGCT CGACGAAGCC
CACGTCGCGA TGACCAACAC CCTCTTCTGG CTCGGCGACA GCGAGGAAGC GCTGGCCTGT
CTCGCGCGCG GCAACCTGCT CGGCGTGGGG CGCAACGACA TCCGTACCGG CTCGCAAGGA
ATCGATCTTG CCAGCCTCGC GTTGACTTTC GAAGGTCTGG CCGCGTATCA GATCGGCGCT
TTCGGGCAGG CGCGGCGCGC CATGGAAATG TTGATCCTGC GCGCGTCCGA ACCGGGTGCG
CACGCGCTCG CTCATGCCGT CAACCTGCAG GGCGCCGCCT GGCTCGCCTG CCTGTTCGAC
GACGTGGACC GGCTCGGCCA TCTCGCGAGC GAACTCGAAT CGGTGTCGAT CGCGAACGGC
TTCGCGTTCT ATCGCGGCGT CGGCCAGGTG CTGCGCGCCT GCCACCTCAG CGCGCTCGGC
CATTCCGACG AAGCGGAAAC CGTCATGCTC GACGGCTACG ACAACCATGT CGTGTGCAAC
GGCGGTGCGC TGTTCTATTC GTTCAAGACA TGGCAGCACG GCGAACTGCT GCTGCGCGCC
GGCCGCGCGA AGATCTGCGA GGCGATTCTC GCCACCGCGA TCGACGAGAC CCTCGCCCGC
CAGGAGCGCG TCTATCTGGG CGAACTGCTG GTCACCCGGG CGCGCGCGCA ATGGGCGCTC
GGTGACGTGA ACGCCGCCGA ACTCGGTCTG CGCACCGCGC TGTCCACCGC GCTCGCGTTC
GGTTCGGTGC CCGCGCGTGT GGACGCCGCG CGCTATCTCG CCGATCTGCT GCGCTCCACC
GGCCGCGGCG CCGAAGCCAT CGACACACTC GAGCGCGGCT TGCGCTCGCT GACCACGGAT
CCGACGACTC GCGTCACCAG CGCCGCGAAT CTGCTTGCCG AACTTCAGCT GGATGCGTCT
TTCAACCTCG ACAGTAAAGG ACTCGCAAAT GGCATATGA
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| Protein sequence | MSYPPVVPFA HDKADSGAFV GGAPAFRQLV RMIDRVAPTD HPLLIFGPTG SGKELVARRV
HAHSQRQDQP FVDVNCGAIP ENLVEAELFG HVKGAFTGAA ENRQGLFQQV GKGTLLLDEI
GELPLALQPK LLRVLETRTF RPIGSSTSLH FAGRVVAATH RDLRELAREG LFREDLFYRL
AVFVLAVPGL EQRIEDIPAL VTHFAAQHAR RLEFSPAAIR RLCQHSWPGH IRQLRNLISQ
LSVLAENTLI DVDSLEPFLA NETSGPVSRA SLADMLLQLE GRDKLAAAED LLIDRALERT
SGNKSAAASM LGVGRKTIER RLKSREEHHR EARKCLEHAS ALIEESKFAE AIPLLRRCLD
LLQTPHEQEA VRRLQFDAYR LLGMSLRSVH GWLYAEATAC YAAALMVGEG VCEPAEIAAI
QFGIWTTQLT TLQLKQARGT AQNMLERAQN GGDRVSLDEA HVAMTNTLFW LGDSEEALAC
LARGNLLGVG RNDIRTGSQG IDLASLALTF EGLAAYQIGA FGQARRAMEM LILRASEPGA
HALAHAVNLQ GAAWLACLFD DVDRLGHLAS ELESVSIANG FAFYRGVGQV LRACHLSALG
HSDEAETVML DGYDNHVVCN GGALFYSFKT WQHGELLLRA GRAKICEAIL ATAIDETLAR
QERVYLGELL VTRARAQWAL GDVNAAELGL RTALSTALAF GSVPARVDAA RYLADLLRST
GRGAEAIDTL ERGLRSLTTD PTTRVTSAAN LLAELQLDAS FNLDSKGLAN GI
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