Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_2052 |
Symbol | |
ID | 6282259 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 2319031 |
End bp | 2319573 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642621617 |
Product | transcriptional regulator, MarR family |
Protein accession | YP_001895683 |
Protein GI | 187924041 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.000132777 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCGCACA CTCCCACCGC GCCCGGTGCC GCTGACGAGC CCCGGCTGAA ACACCCCAGC CATATCGATG AGTTTCTGCT GTACCGGTTG CATAACCTGA CGCGCGTCGC GGTTCAAGGA GTCGGGTTGA TGTTCCGGCG TGAAATAGGC ATTAGCCGGC GTGACTGGCG CGTCCTGGCG TTCGTTGGCC GATTCCCCGA CCTCAACCTC ACACGGCTGG CGGAACTCAC AGGACTGGAC ACGGTGATCG CGAGCCGGTG CGTTACGCAG CTCGTGCAAC GCGGGCTGCT GGCGAACCGG AGACAACCGG CGAACAAGCG TGTTTCCTTG CTGCGGCTCA CTGAATCAGG CGAGCAGGTG TACGCGCAGG CACACGCTGC CGGCCAGCAA TACAACATCG AATTCGCCGC TTGCCTGAAT GATGACGAGG CGCGCCTGCT GGAGACCGTG ATGTCAAAGC TCGAAGCGCG GGCTCACGAA TTGAATCAAC GCGAGATTGC GTTTGGCGTC GACAGCCGGG AAGGCGACAG CGTCGAAGAG TGA
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Protein sequence | MSHTPTAPGA ADEPRLKHPS HIDEFLLYRL HNLTRVAVQG VGLMFRREIG ISRRDWRVLA FVGRFPDLNL TRLAELTGLD TVIASRCVTQ LVQRGLLANR RQPANKRVSL LRLTESGEQV YAQAHAAGQQ YNIEFAACLN DDEARLLETV MSKLEARAHE LNQREIAFGV DSREGDSVEE
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