| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1993 |
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| Symbol | |
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| ID | 6284060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 2250694 |
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| End bp | 2252355 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642621558 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_001895624 |
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| Protein GI | 187923982 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.689295 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTACG ATTACATCAT CGTCGGCGCG GGTTCGGCGG GCTGCATTCT CGCTAATCGC
CTGTCGGCGT CGGGCCAATA CTCGGTACTG CTGCTCGAAG CGGGCGGCAA GGACAGCTCG
TTCTGGTTCA AGATTCCGGT GGGTTTCACC AAGACGTATT ACAACGAAAC CTACAACTGG
ATGTACTACA GCGAGCCGGA AAAGGAACTC GACAACCGGC CGATCTATTG TCCGCGCGGC
AAGGTGCAGG GCGGCTCGGG CTCGATCAAC GCGATGATTT ATGTGCGCGG CCAGCCGCAT
GATTTCGACG ATTGGGCCGC CGCCGGCAAT ACAGGTTGGG CATTTCGCGA CGTGCTGCCG
TATTTCCGCA AGCTCGAATC GCATCCGCTC GGCAATACGG ACTATCACGG CGCCGACGGA
CCGATACGTA TTTCGCCGAT GAAAGACGCG GTGCATCCGA TCTGCCACGT GTTTCTGAAA
GGCTGTGATC AGGCCGGCTA TCAACGCAGC GACGACTTCA ACGGCGCGCA ATTCGAAGGC
GCCGGCATTT ACGATGTGAA TACGCGTAAC GGCCAGCGCT CGTCGAGCAG CTTCGAGTAT
CTGCACCCGG TGCTCTCGCG CAAGAACCTC ACCGTCGAGC GCGACGTGCT GGCAAGCCGC
GTTCTATTCG ACGGCAAGCA ACACGCGATC GGCGTGAGCG TCATGCAGAA CGGCACCACG
CGGCAATTCA TGGCGACGCG CGAAGTAATT CTGTCGGCGG GCGCGGTCGA TTCGCCGAAG
CTGCTGCAAC TCTCCGGCGT AGGCGACAGC GCGTTGCTGG CGAAGCATCG CATCGCGATG
GTCAAGGAAC TGCCCGCCGT GGGCCAGAAT CTGCAAGACC ATTTGTGCGT GAGCTTCTAC
TATCGCGCGA ATATGAAGAC GCTGAACGAC GAAATGCGGC CGCTGCTCGG CAAGCTCAAG
CTCGGTCTGC AATATCTGCT GACGCGCAAA GGACCGCTCG CGATGAGCGT GAACCAGTCG
GGCGGCTTCT TCAAAGGCAA TGATCTGCAA ACGCAGCCGA ATCTGCAGTT GTACTTCAAT
CCGTTGTCGT ACCGCATTCC GAAGAGCAAC AAGGCGAATC TCGAACCCGA ACCGTACTCG
GGCTTTCTGC TGGCGTTCAA TCCGTGCCGG CCGACCAGCC GCGGTTCGAT CGAGATCGCA
TCGAATCGCG CCGAAGACTC CGCGAAGATC CGCATCAACG CGCTGACCAC GGAGAAGGAC
ATCGACGAAG TGATCCAGGG GTGCGAACTG GTGCGCAAGG TGATGGCGTC GCCGGCGTTG
AAGGCGATCA CGGTCGAGGA AATCTCGCCG GGGCCGCAGG TGAATACGCG CGAGGGCTTT
CTGCAGTACT TCCGTGAGCA ATCGGGCTCG ATCTATCACC TGTGCGGTTC GTGCGCGATG
GGCGACGATC CGCGCAGCTC GGTGGTGGAT GCGCGATTGC GCGTGCACGG TATCGCGGGC
TTGCGCGTGG TCGATGCGTC GATCTTCCCG AACATCACGT CGGGCAATAT CAATGCACCG
ACCATGATGG TGGCGGAGAA GGGCGCCGAC ATGATTCTCG AAGACGCCGC GAGCGAAGTT
GCGTATCGGC CTGTAACCGC GGAGATGGCT GCGGCTGCGT GA
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| Protein sequence | MNYDYIIVGA GSAGCILANR LSASGQYSVL LLEAGGKDSS FWFKIPVGFT KTYYNETYNW
MYYSEPEKEL DNRPIYCPRG KVQGGSGSIN AMIYVRGQPH DFDDWAAAGN TGWAFRDVLP
YFRKLESHPL GNTDYHGADG PIRISPMKDA VHPICHVFLK GCDQAGYQRS DDFNGAQFEG
AGIYDVNTRN GQRSSSSFEY LHPVLSRKNL TVERDVLASR VLFDGKQHAI GVSVMQNGTT
RQFMATREVI LSAGAVDSPK LLQLSGVGDS ALLAKHRIAM VKELPAVGQN LQDHLCVSFY
YRANMKTLND EMRPLLGKLK LGLQYLLTRK GPLAMSVNQS GGFFKGNDLQ TQPNLQLYFN
PLSYRIPKSN KANLEPEPYS GFLLAFNPCR PTSRGSIEIA SNRAEDSAKI RINALTTEKD
IDEVIQGCEL VRKVMASPAL KAITVEEISP GPQVNTREGF LQYFREQSGS IYHLCGSCAM
GDDPRSSVVD ARLRVHGIAG LRVVDASIFP NITSGNINAP TMMVAEKGAD MILEDAASEV
AYRPVTAEMA AAA
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